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Protein Overview: SKP2B_ARATH

General Information:
Name(s) found: SKP2B_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 360 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: heat acclimation [IEP]
    proteolysis involved in cellular protein catabolic process [IMP]
    ubiquitin-dependent protein catabolic process [TAS]
    Molecular Function: ubiquitin-protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSEGATRKE LNLCFENMKM EGVLISEWKD IPVELLMKIL NLVDDRTVII ASCICSGWRD  60
   61 AVSLGLTRLS LSWCKKNMNS LVLSLAPKFV KLQTLVLRQD KPQLEDNAVE AIANHCHELQ 120
  121 DLDLSKSSKI TDHSLYSLAR GCTNLTKLNL SGCTSFSDTA LAHLTRFCRK LKILNLCGCV 180
  181 EAVSDNTLQA IGENCNQLQS LNLGWCENIS DDGVMSLAYG CPDLRTLDLC SCVLITDESV 240
  241 VALANRCIHL RSLGLYYCRN ITDRAMYSLA QSGVKNKHEM WRAVKKGKFD EEGLRSLNIS 300
  301 QCTYLTPSAV QAVCDTFPAL HTCSGRHSLV MSGCLNLQSV HCACILQAHR THTVYPHPAH 360
  361

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..360] PSI-BLAST 19.39794 No description for 2p1mB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle