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Protein Overview: gi|15221423, gi|...

General Information:
Name(s) found: gi|8844127 [NCBI NR]
gi|30679607 [NCBI NR]
gi|25299537 [NCBI NR]
gi|15221423 [NCBI NR]
gi|110741512 [NCBI NR]
Description(s) found:
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  • gi|8844127|gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens gi|4759280 and contains elongation factor G C-terminus PF|00679 and is a member of the elongation factor Tu family PF|00009. [Arabidopsis thal [NCBI NR]
  • gi|30679607|ref|NP_849600.1| MEE5 (MATERNAL EFFECT EMBRYO ARREST 5); GTP binding / GTPase/ translation elongation factor/ translation factor, nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
  • pir||H86197 hypothetical protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221423|ref|NP_172112.1| MEE5 (MATERNAL EFFECT EMBRYO ARREST 5); GTP binding / GTPase/ translation elongation factor/ translation factor, nucleic acid binding [Arabidopsis thaliana] [NCBI NR]
  • gi|110741512|dbj|BAE98706.1| elongation factor like protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LNC5) F9P14.8 protein [athaliana3702.FASTAC.txt]
  • elongation factor Tu family protein [Arabidopsis thaliana]gi|30679607|ref|NP_849600.1| elongation factor Tu family protein [Arabidopsis thaliana]gi|25299537|pir||H86197 hypothetical protein [imported] - Arabidopsis thalianagi|8844127|gb|AAF80219.1| Con [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Elongation factor Tu family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MEE5 | MEE5 (maternal effect embryo arrest 5); translation elongation factor/ translation factor, nucleic acid binding | chr1:1900523-1904582 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens gi|4759280 and contains elongation factor G C-terminus PF|00679 and is a member of the elongation factor Tu family PF|00009. [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • GTP binding / translation elongation factor/ translation factor, nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • elongation factor like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MEE5 (MATERNAL EFFECT EMBRYO ARREST 5); GTP binding / GTPase/ translation elongation factor/ translation factor, nucleic acid binding [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | Symbols: MEE5 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:1900524-1904583 FORWARD LENGTH=987 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: MEE5, CLO, GFA1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:1900524-1904583 FORWARD LENGTH=987 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Elongation factor like protein OS=Arabidopsis thaliana GN=F9P14.8 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 987 amino acids

    Gene Ontology:
    Cellular Component: nuclear speck [IDA]
    cell wall [IDA]
    plasma membrane [IDA]
    Biological Process: regulation of embryo sac egg cell differentiation [IMP]
    embryonic development ending in seed dormancy [IMP]
    Molecular Function: GTP binding [IEA]
    translation elongation factor activity [ISS]
    GTPase activity [IEA]
    translation factor activity, nucleic acid binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSLYDEFG NYVGPEIESD RDSDDEVEDE DLQDKHLEEN GSDGEQGPGG SNGWITTIND  60
   61 VEMENQIVLP EDKKYYPTAE EVYGEDVETL VMDEDEQPLE QPIIKPVRDI RFEVGVKDQA 120
  121 TYVSTQFLIG LMSNPALVRN VALVGHLQHG KTVFMDMLVE QTHHMSTFNA KNEKHMKYTD 180
  181 TRVDEQERNI SIKAVPMSLV LEDSRSKSYL CNIMDTPGHV NFSDEMTASL RLADGAVLIV 240
  241 DAAEGVMVNT ERAIRHAIQD HLPIVVVINK VDRLITELKL PPRDAYYKLR HTIEVINNHI 300
  301 SAASTTAGDL PLIDPAAGNV CFASGTAGWS FTLQSFAKMY AKLHGVAMDV DKFASRLWGD 360
  361 VYYHSDTRVF KRSPPVGGGE RAFVQFILEP LYKIYSQVIG EHKKSVETTL AELGVTLSNS 420
  421 AYKLNVRPLL RLACSSVFGS ASGFTDMLVK HIPSPREAAA RKVDHSYTGT KDSPIYESMV 480
  481 ECDPSGPLMV NVTKLYPKSD TSVFDVFGRV YSGRLQTGQS VRVLGEGYSP EDEEDMTIKE 540
  541 VTKLWIYQAR YRIPVSSAPP GSWVLIEGVD ASIMKTATLC NASYDEDVYI FRALQFNTLP 600
  601 VVKTATEPLN PSELPKMVEG LRKISKSYPL AITKVEESGE HTILGTGELY LDSIMKDLRE 660
  661 LYSEVEVKVA DPVVSFCETV VESSSMKCFA ETPNKKNKIT MIAEPLDRGL AEDIENGVVS 720
  721 IDWNRKQLGD FFRTKYDWDL LAARSIWAFG PDKQGPNILL DDTLPTEVDR NLMMAVKDSI 780
  781 VQGFQWGARE GPLCDEPIRN VKFKIVDARI APEPLHRGSG QMIPTARRVA YSAFLMATPR 840
  841 LMEPVYYVEI QTPIDCVTAI YTVLSRRRGH VTSDVPQPGT PAYIVKAFLP VIESFGFETD 900
  901 LRYHTQGQAF CLSVFDHWAI VPGDPLDKAI QLRPLEPAPI QHLAREFMVK TRRRKGMSED 960
  961 VSGNKFFDEA MMVELAQQTG DLHLQMI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 23.154902 No description for 2hjgA was found.
    2 View Details [121..987] PSI-BLAST 1000.0 Elongation factor 2 (eEF-2), domain II; Elongation factor 2 (eEF-2), N-terminal (G) domain; Elongation factor 2 (eEF-2), domain IV; Elongation factor 2 (eEF-2)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle