YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PPOX1_ARATH

General Information:
Name(s) found: PPOX1_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|8777428|dbj|BAA97018.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|30695795|ref|NP_568717.2| ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE); pyridoxamine-phosphate oxidase [Arabidopsis thaliana] [NCBI NR]
  • Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic OS=Arabidopsis thaliana GN=PPOX1 PE=1 SV=1 [Swiss-Prot]
  • (Q9LTX3) Similarity to pyridoxamine 5-phosphate oxidase [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|30695795|ref|NP_568717.2| pyridoxamine 5'-phosphate oxidase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pyridoxamine 5'-phosphate oxidase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATPPOX | ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE); pyridoxamine-phosphate oxidase | chr5:20346439-20350126 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pyridoxamine-phosphate oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATPPOX, PDX3, PPOX | pyridoxin (pyrodoxamine) 5'-phosphate oxidase | chr5:20329213-20332900 FORWARD LENGTH=530 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 530 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridoxine biosynthetic process [ISS]
    pyridoxal metabolic process [IGI]
    Molecular Function: pyridoxamine-phosphate oxidase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNVIRRVTT MTFTFLLQSP PLPISPSPPQ FSLSSSPLSK TQRFITPSQG SRLRTLCTKV  60
   61 IIPNMQDSGS PPLSYLTQRE AAEIDETLMG PLGFSIDQLM ELAGLSVAAS IAEVYKPEEY 120
  121 SRVLAICGPG NNGGDGLVAA RHLHHFGYKP FICYPKRTAK PLYTGLVTQL DSLSVPFVSV 180
  181 EDLPDDLSKD FDVIVDAMFG FSFHGAPRPP FDDLIRRLVS LQNYEQTLQK HPVIVSVDIP 240
  241 SGWHVEEGDH EDGGIKPDML VSLTAPKLCA KRFRGPHHFL GGRFVPPSVA EKYKLELPSY 300
  301 PGTSMCVRIG KPPKVDISAM RVNYVSPELL EEQVETDPTV QFRKWFDEAV AAGLRETNAM 360
  361 ALSTANKDKK PSSRMVLLKG FDENGFVWFT NYESKKGSDL SENPSAALLF YWEILNRQVR 420
  421 IEGPVERIPE SESENYFHSR PRGSQIGAIV SKQSSVVPGR HVLYDEYEEL TKQYSDGSVI 480
  481 PKPKNWGGFR LKPNLFEFWQ GQPSRLHDRL QYSLQDVNGN PAWKIHRLAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 56.69897 No description for 2dg2A was found.
    2 View Details [312..530] PSI-BLAST 60.30103 Pyridoxine 5'-phoshate oxidase (PNP oxidase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • pyridoxamine-phosphate oxidase activity
    		•  3.81533880638523 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.42542685165554 bayes_pls_golite062009
  • binding
    		•  1.05144467714321 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.01890811282115 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.884353076582842 bayes_pls_golite062009
  • catalytic activity
    		•  0.660906721832294 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.219267579186577 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle