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Protein Overview: AIP12_ARATH

General Information:
Name(s) found: AIP12_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Actin-interacting protein 1-2 OS=Arabidopsis thaliana GN=AIP1-2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 609 amino acids

    Gene Ontology:
    Cellular Component: CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSETYACV PSTERGRGIL ISGNSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT  60
   61 VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKNEFKVLAG RIDDLQWSAD GMRIVASGDG 120
  121 KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK 180
  181 LSSREHSNFV NCVRFAPDGS KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW 240
  241 SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS 300
  301 LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG 360
  361 KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT NEESIDIGNQ PKDLSLAPLS 420
  421 PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS 480
  481 LTEEAVLERH RGAISVIRYS PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL 540
  541 AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC 600
  601 IRVWSFTPQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..609] PSI-BLAST 92.154902 Actin interacting protein 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  3.86142918698875 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  3.1056443224755 bayes_pls_golite062009
  • snoRNA binding
    		•  2.62514080753887 bayes_pls_golite062009
  • binding
    		•  2.42570478946173 bayes_pls_golite062009
  • actin filament binding
    		•  2.0735069176589 bayes_pls_golite062009
    		• 1.50619197793697 bayes_pls_golite062009
  • myosin heavy chain kinase activity
    		•  1.24520283111044 bayes_pls_golite062009
  • protein binding
    		•  1.21879977456466 bayes_pls_golite062009
  • transporter activity
    		•  1.21549336905926 bayes_pls_golite062009
  • receptor activity
    		•  1.12819778129653 bayes_pls_golite062009
  • structural molecule activity
    		•  1.01626378719151 bayes_pls_golite062009
  • myosin binding
    		•  0.989691178611801 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.974380908248463 bayes_pls_golite062009
  • signal transducer activity
    		•  0.974380908248463 bayes_pls_golite062009
  • tubulin binding
    		•  0.968047176592527 bayes_pls_golite062009
  • microtubule binding
    		•  0.834073483714259 bayes_pls_golite062009
  • RNA binding
    		•  0.77140777609125 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.734793983890004 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.579815310385678 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.570141050045461 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  0.472334429918085 bayes_pls_golite062009
  • dynein binding
    		•  0.41765917405931 bayes_pls_golite062009
  • receptor binding
    		•  0.316169754698691 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.118975415284669 bayes_pls_golite062009
  • DNA binding
    		•  0.0736878329528894 bayes_pls_golite062009
  • myosin II binding
    		•  0.0145748031956598 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle