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Protein Overview: RK5_ARATH

General Information:
Name(s) found: RK5_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • 50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana GN=RPL5 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    cytosolic ribosome [IDA]
    membrane [IDA]
    chloroplast envelope [IDA]
    cytosolic large ribosomal subunit [ISS]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPSLLQSS ASSFHGRFSP LAAPSSARML SPPLRNVVKV SASGTVLVEK SEAEKTQRLK  60
   61 TAYLERIIPA LKEEFKYVNI HQVPKVQKIV VNCGIGDAAQ NDKGLEAAMK DIALITGQKP 120
  121 IKTRARASIA TFKIREDQPL GIAVTLRGDV MYSFLDRLIN LALPRTRDFQ GVSPSSFDGN 180
  181 GNYSIGVKDQ GVFPEIRFDA VGKTRGMDVC ISTTAKSDQE GQKLLALMGM PFREGGGGST 240
  241 GAIVRKKKLK SHHFDAKGKG KR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] PSI-BLAST 78.0 Ribosomal protein L5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  10.0077098174023 bayes_pls_golite062009
  • structural molecule activity
    		•  9.43117206427219 bayes_pls_golite062009
  • binding
    		•  1.22985833191636 bayes_pls_golite062009
  • protein binding
    		•  0.551360246680731 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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