YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RK5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPSLLQSS ASSFHGRFSP LAAPSSARML SPPLRNVVKV SASGTVLVEK SEAEKTQRLK  60
   61 TAYLERIIPA LKEEFKYVNI HQVPKVQKIV VNCGIGDAAQ NDKGLEAAMK DIALITGQKP 120
  121 IKTRARASIA TFKIREDQPL GIAVTLRGDV MYSFLDRLIN LALPRTRDFQ GVSPSSFDGN 180
  181 GNYSIGVKDQ GVFPEIRFDA VGKTRGMDVC ISTTAKSDQE GQKLLALMGM PFREGGGGST 240
  241 GAIVRKKKLK SHHFDAKGKG KR

Type	Start	End	Confidence
Signal Peptide	1	22	0.54
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	262	0.99