YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CCD1_ARATH

General Information:
Name(s) found: CCD1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: carotenoid catabolic process [IDA]
    carotene catabolic process [IMP]
    xanthophyll catabolic process [IMP]
    response to water deprivation [IEP]
    Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP  60
   61 PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD GMIHGVRIKD GKATYVSRYV 120
  121 KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH 180
  181 GKLLALQEAD KPYVIKVLED GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT 240
  241 PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI 300
  301 YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD 360
  361 MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD FPRINECYTG KKQRYVYGTI 420
  421 LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG 480
  481 YLIFFVHDEN TGKSCVTVID AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..538] PSI-BLAST 120.0 Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle