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Protein Overview: DNJ36_ARATH

General Information:
Name(s) found: DNJ36_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9757767|dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana] [NCBI NR]
  • gi|7413593|emb|CAB86083.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21553467|gb|AAM62560.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|15242650|ref|NP_195936.1| ATP58IPK (ARABIDOPSIS HOMOLOG OF MAMALLIAN P58IPK); binding / heat shock protein binding [Arabidopsis thaliana] [NCBI NR]
  • pir||T48337 hypothetical protein F15A17.190 - Arabidopsis thaliana [NCBI NR]
  • DnaJ protein P58IPK homolog OS=Arabidopsis thaliana GN=P58IPK PE=1 SV=1 [Swiss-Prot]
  • (Q9LYW9) Hypothetical protein (Tetratricopeptide repeat protein 2-like) [athaliana3702.FASTAC.txt]
  • unknown [Arabidopsis thaliana]gi|9757767|dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana]gi|7413593|emb|CAB86083.1| putative protein [Arabidopsis thaliana]gi|11357454|pir||T48337 hypothetical protein F15A17.190 - Arabidops [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:750285-752670 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • tetratricopeptide repeat protein 2-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATP58IPK, P58IPK | homolog of mamallian P58IPK | chr5:750286-752671 FORWARD LENGTH=482 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Mamallian P58IPK-like protein OS=Arabidopsis thaliana GN=F15A17_190 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 482 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum lumen [IDA]
    endoplasmic reticulum [IDA]
    plasma membrane [IDA]
    Biological Process: protein folding [ISS]
    Molecular Function: heat shock protein binding [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLFRVWSGM DFLAWRGMAY TLLLLNFVFA CQLLLLQPLV SALDGQSVDA AELFERASQS  60
   61 IKVKRYSDAL DDLNAAIEAD PALSEAYFKR ASVLRHFCRY EDSENSYQKY LEFKSGDSNA 120
  121 EKELSQLHQA KSALETASTL YESKDIAKAL EFVDKVVLVF SPACSKAKLL KVKLLMVSKD 180
  181 YSGAISETGY ILKEDENNLE ALLLRGRAYY YLADHDIAQR HYQKGLRLDP EHSELKKAYF 240
  241 GLKKLLKKTK SAEDNANKGK LRVSAEEYKE AIALDPEHTA NNVHLYLGLC KVSVRLGRGK 300
  301 DGLNSCNEAL NIDAELIEAL HQRGEAKLLL EDWEGAVEDL KQAAQNSQDM EIHESLGKAE 360
  361 KALKMSKRKD WYKILGISRT ASISEIKKAY KKLALQWHPD KNVGNREEAE NKFREIAAAY 420
  421 EILGDDDKRA RFDRGEDLED MGGGGGGGYN PFHGGGGGGQ QYTFHFEGGF PGGGGGFGGF 480
  481 GF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 51.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [382..482] PSI-BLAST 4.69897 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.464784360193814 bayes_pls_golite062009
  • protein binding
    		•  0.260288300498402 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.376428146977706 bayes_pls_golite062009
  • protein binding
    		•  0.241757628118922 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle