| Protein: | DNJ36_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 482 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNJ36_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
283.0 | [0..10] | [470..49] |
|
Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MDLFRVWSGM DFLAWRGMAY TLLLLNFVFA CQLLLLQPLV SALDGQSVDA AELFERASQS 60
61 IKVKRYSDAL DDLNAAIEAD PALSEAYFKR ASVLRHFCRY EDSENSYQKY LEFKSGDSNA 120
121 EKELSQLHQA KSALETASTL YESKDIAKAL EFVDKVVLVF SPACSKAKLL KVKLLMVSKD 180
181 YSGAISETGY ILKEDENNLE ALLLRGRAYY YLADHDIAQR HYQKGLRLDP EHSELKKAYF 240
241 GLKKLLKKTK SAEDNANKGK LRVSAEEYKE AIALDPEHTA NNVHLYLGLC KVSVRLGRGK 300
301 DGLNSCNEAL NIDAELIEAL HQRGEAKLLL EDWEGAVEDL KQAAQNSQDM EIHESLGKAE 360
361 KALKMSKRKD WYKILGISRT A
|
| Detection Method: |  |
| Confidence: | 51.69897 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.464784360193814 | bayes_pls_golite062009 |
| protein binding | 0.260288300498402 | bayes_pls_golite062009 |
|
Region A: Residues: [382-482] |
1 11 21 31 41 51
| | | | | |
1 SISEIKKAYK KLALQWHPDK NVGNREEAEN KFREIAAAYE ILGDDDKRAR FDRGEDLEDM 60
61 GGGGGGGYNP FHGGGGGGQQ YTFHFEGGFP GGGGGFGGFG F
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.376428146977706 | bayes_pls_golite062009 |
| protein binding | 0.241757628118922 | bayes_pls_golite062009 |
