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Protein Overview: PAT_ARATH

General Information:
Name(s) found: PAT_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Arabidopsis thaliana GN=PAT PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 475 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: embryonic development ending in seed dormancy [IMP]
    Molecular Function: pyridoxal phosphate binding [IEA]
    transferase activity, transferring nitrogenous groups [IEA]
    catalytic activity [IEA]
    L-aspartate:2-oxoglutarate aminotransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQSSVAVI SSAAARGESF PDSKKPIGSV RFQQPLRLSF SYCKSGNMSS RICAMAKPND  60
   61 AETLSSSVDM SLSPRVQSLK PSKTMVITDL AATLVQSGVP VIRLAAGEPD FDTPKVVAEA 120
  121 GINAIREGFT RYTLNAGITE LREAICRKLK EENGLSYAPD QILVSNGAKQ SLLQAVLAVC 180
  181 SPGDEVIIPA PYWVSYTEQA RLADATPVVI PTKISNNFLL DPKDLESKLT EKSRLLILCS 240
  241 PSNPTGSVYP KSLLEEIARI IAKHPRLLVL SDEIYEHIIY APATHTSFAS LPDMYERTLT 300
  301 VNGFSKAFAM TGWRLGYLAG PKHIVAACSK LQGQVSSGAS SIAQKAGVAA LGLGKAGGET 360
  361 VAEMVKAYRE RRDFLVKSLG DIKGVKISEP QGAFYLFIDF SAYYGSEAEG FGLINDSSSL 420
  421 ALYFLDKFQV AMVPGDAFGD DSCIRISYAT SLDVLQAAVE KIRKALEPLR ATVSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] PSI-BLAST 3.30103 No description for 2du9A was found.
    2 View Details [71..475] PSI-BLAST 83.522879 Aspartate aminotransferase, AAT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  5.51961002550688 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • 4-aminobutyrate transaminase activity
    		•  1.82501790383768 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • histidinol-phosphate transaminase activity
    		•  1.26617748508821 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
    		•  0.942545094747784 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds
    		•  0.845816961387768 bayes_pls_golite062009
  • binding
    		•  0.536634592992536 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.319452731970428 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • aromatic-amino-acid:2-oxoglutarate aminotransferase activity
    		•  0.0916183433120769 bayes_pls_golite062009
  • kynureninase activity
    		•  0.0900983660305177 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.0833010353195099 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.013097682076602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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