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Protein Overview: TYDC2_ARATH

General Information:
Name(s) found: TYDC2_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Probable tyrosine decarboxylase 2 OS=Arabidopsis thaliana GN=At4g28680 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    Biological Process: cellular amino acid metabolic process [ISS]
    response to stress [IEP]
    Molecular Function: tyrosine decarboxylase activity [IDA][ISS]
    aromatic-L-amino-acid decarboxylase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKPQHMYDR EFGTGNGYSN GNGYTNGNGH TNGNGNYNGN GHVNGNGKAN GAKVVKMKPM  60
   61 DSELLREQGH IMVDFIADYY KNLQDSPQDF PVLSQVQPGY LRDMLPDSAP ERPESLKELL 120
  121 DDVSKKIMPG ITHWQSPSYF AYYASSTSVA GFLGEMLNAG LSVVGFTWLT SPAATELEII 180
  181 VLDWLAKLLQ LPDHFLSTGN GGGVIQGTGC EAVLVVVLAA RDRILKKVGK TLLPQLVVYG 240
  241 SDQTHSSFRK ACLIGGIHEE NIRLLKTDSS TNYGMPPESL EEAISHDLAK GFIPFFICAT 300
  301 VGTTSSAAVD PLVPLGNIAK KYGIWLHVDA AYAGNACICP EYRKFIDGIE NADSFNMNAH 360
  361 KWLFANQTCS PLWVKDRYSL IDALKTNPEY LEFKVSKKDT VVNYKDWQIS LSRRFRSLKL 420
  421 WMVLRLYGSE NLRNFIRDHV NLAKHFEDYV AQDPSFEVVT TRYFSLVCFR LAPVDGDEDQ 480
  481 CNERNRELLA AVNSTGKIFI SHTALSGKFV LRFAVGAPLT EEKHVTEAWQ IIQKHASKFT 540
  541 RNDHY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..545] PSI-BLAST 100.0 DOPA decarboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
    		•  1.01853440922526 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.130698724135981 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.11598778799668 bayes_pls_golite062009
  • aromatic-L-amino-acid decarboxylase activity
    		•  0.10589462882093 bayes_pls_golite062009
  • binding
    		•  0.0138724523355769 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle