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Protein Overview: gi|15242223, gi|...

General Information:
Name(s) found: gi|91806860 [NCBI NR]
gi|7671483 [NCBI NR]
gi|15242223 [NCBI NR]
gi|11358633 [NCBI NR]
Description(s) found:
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  • gi|91806860|gb|ABE66157.1| aldose 1-epimerase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|7671483|emb|CAB89324.1| putative aldose 1-epimerase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15242223|ref|NP_197018.1| aldose 1-epimerase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T49949 probable aldose 1-epimerase-like protein - Arabidopsis thaliana [NCBI NR]
  • (Q9LXG7) Putative aldose 1-epimerase-like protein [athaliana3702.FASTAC.txt]
  • putative aldose 1-epimerase-like protein [Arabidopsis thaliana]gi|11358633|pir||T49949 probable aldose 1-epimerase-like protein - Arabidopsis thalianagi|15242223|ref|NP_197018.1| aldose 1-epimerase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aldose 1-epimerase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aldose 1-epimerase family protein | chr5:4908689-4910673 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • aldose 1-epimerase family protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • aldose 1-epimerase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative aldose 1-epimerase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Galactose mutarotase-like superfamily protein | chr5:4908686-4910670 FORWARD LENGTH=490 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Aldose 1-epimerase OS=Arabidopsis thaliana GN=F8M21_30 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 490 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    hexose metabolic process [IEA]
    galactose metabolic process [ISS]
    Molecular Function: aldose 1-epimerase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSSVLLCL ILLVTLGVVI SVTFADNVEL KSKDLESSKK DKKVDHDSTH KEKGGEKVDG  60
   61 AGSDDEDNDK KEKKKEHDVQ KKDKQHENKD KDDEKKHVDK KKSGGHDKDD DDEKKHKDKK 120
  121 KDGHNDDDDS DDDTDDDDDD DDDDDDDDEV DGDDNEKEKI GLYELKKGNL TVKFTNWGAS 180
  181 IISLHFPDKN GKMDDIVLGY DSVKTYKTDK VYFGATVGRV ANRIGKGKFK LNGKEYKTSV 240
  241 NDGKNTLHGG KKGFGDVVWA VAKHQYDGKK PHIVFTHTSP DGDQGFPGEL SVTVTYKLVK 300
  301 DNELSVVMEA KPKDKATPVN LAHHSYWNLG GHNSGDILSE EIQILGSGYT PVDGELIPTG 360
  361 KINPVKGTAY DFLQLRPIKD NMKDLKTGYD INYCLDGKAK KMRKIVELVD KKSGRKMELS 420
  421 GNQAGLQFYT GGMLKDVKGK NGAVYQAFGG LCLETQSYPD ALNHPKFPSQ IVEPGKKYKH 480
  481 TMLFKFSIVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.
    2 View Details [146..490] PSI-BLAST 118.0 Crystal structure of apo human galactose mutarotase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • aldose 1-epimerase activity
    		•  2.85100059704396 bayes_pls_golite062009
  • catalytic activity
    		•  0.770933849734279 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.68102716507433 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.473636146090495 bayes_pls_golite062009
  • UDP-glucose 4-epimerase activity
    		•  0.46846097606394 bayes_pls_golite062009
  • binding
    		•  0.381228414514023 bayes_pls_golite062009
  • isomerase activity
    		•  0.106573908779409 bayes_pls_golite062009
  • protein binding
    		•  0.078592895113726 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle