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Protein Overview: gi|5903081, gi|2...

General Information:
Name(s) found: gi|5903081 [NCBI NR]
gi|25406232 [NCBI NR]
gi|15218627 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|5903081|gb|AAD55639.1|AC008017_12 Similar to part of disease resistance protein [Arabidopsis thaliana] [NCBI NR]
  • pir||D96754 Similar to part of disease resistance protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218627|ref|NP_177435.1| disease resistance protein (TIR-NBS class), putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: response to wounding [IEP]
    defense response [ISS]
    Molecular Function: transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPTATKYD VFLSFRGLDT RRNFISFLYK ELVRRKIRTF KDDKELENGR RISPELKRAI  60
   61 EESKFAVVVV SVNYAASPWC LDELVKIMDF ENKGSITVMP IFYGVDPCHL RRQIGDVAEQ 120
  121 FKKHEAREED HEKVASWRRA LTSLASISGE CSLKWEDEAN LVDEIADKIS KNLMTVTTIS 180
  181 NGRDLVGIDT HMKALNKKLD LNSNKSLRVV GIWARGYNGR SALAKYVYQD ICHWLKVGWL 240
  241 KVYQDIKTAS KLYVLTRWLK VAHLLHRSHH SFKTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 15.09691 Toll-like receptor 1, TLR1
    2 View Details [155..275] FFAS03 2.64 Structure of the apoptotic protease-activating factor 1 bound to ADP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.261666574457319 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle