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Protein Overview: gi|15222414, gi|...

General Information:
Name(s) found: gi|15222414 [NCBI NR]
gi|12597844 [NCBI NR]
Description(s) found:
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  • gi|15222414|ref|NP_174448.1| copper amine oxidase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12597844|gb|AAG60154.1|AC074360_19 copper amine oxidase, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9C6V7) Copper amine oxidase, putative (EC 1.4.3.6) [athaliana3702.FASTAC.txt]
  • copper amine oxidase, putative [Arabidopsis thaliana]gi|15222414|ref|NP_174448.1| copper amine oxidase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Copper amine oxidase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | copper amine oxidase, putative | chr1:11337539-11341870 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • copper ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • copper amine oxidase, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Copper amine oxidase family protein | chr1:11337558-11341889 FORWARD LENGTH=741 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Amine oxidase OS=Arabidopsis thaliana GN=F27M3_13 PE=3 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 741 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: amine metabolic process [IEA]
    Molecular Function: copper ion binding [IEA][ISS]
    quinone binding [IEA]
    amine oxidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNRDNSIVA LSFFMLFLLV LHLHFETTTA ARKPVRVFGP PSSIEWSPPS PPKDDFEWFE  60
   61 INIYKNIEQT AFRPTGQGPS QGIGHKDPPV FSSVFVIGSL SFIPPPHPFD PLTEIELNLV 120
  121 RNIINERYPI GLEHRFTFQY VGLNEPDKSL VLSWVSSQYH NVKSPPRQAF VIARDHGKTR 180
  181 EIVVDFASQA IVSEKIHVGN GYPMLTIDEQ QATSELVLKF KPFRDSIRRR GLNVSEVVVT 240
  241 TSTMGWFGEA KPERLIKKRP FYLNGSVNTY LRPIEGMTII VNLDQMKVTK FRDRFTSPLP 300
  301 NAKGTEFRIS KLKPPFGPSL QNAVLFQSEG PGFKIDGHTN RWANWEFHMS FDVRAGLVIS 360
  361 LASIFDMDVN KYRQVLYKGH LSEIFVPYMD PSEDWYFRTF FDCGEFGCGQ YAVSLEPYTD 420
  421 CPGNAAFMDG VFASQDGTPI KITNVMCIFE KYAGDIMWRH TEIEIPGLKV RPDVSLVVRM 480
  481 VTTVGNYDYI VDYEFKPSGS IKIGVGLTGV LEVKPVKYVN TSEIKEDDIH GTIVADNTIG 540
  541 VNHDHFVTYR LDLDIDGTDN SFVRSELVTK RTPKSVNTPR KSYWTTKRLK AEELLVVNPS 600
  601 RKTKHGNEVG YRLLHGPASE GPLLAQDDYP QIRAAFTNYN VWITPYNNTE VWASGLYADR 660
  661 SQGDDTLAVW SQRNRKIEKT DIVMWYTVGF HHVPCQEDFP TMPTLFGGFE LRPTNFFEQN 720
  721 PDLKTKPIKL NTTPTCTARN D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] MSA 1.01997 View MSA. No confident structure predictions are available.
    2 View Details [90..741] PSI-BLAST 1000.0 PSAO and Xenon

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • copper ion binding
    		•  1.78083444022234 bayes_pls_golite062009
  • binding
    		•  1.52650749686101 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.04273547518 bayes_pls_golite062009
  • cation binding
    		•  0.886809852927978 bayes_pls_golite062009
  • metal ion binding
    		•  0.886809852927978 bayes_pls_golite062009
  • ion binding
    		•  0.880849428582846 bayes_pls_golite062009
  • catalytic activity
    		•  0.672290280263588 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.668245465199827 bayes_pls_golite062009
  • amine oxidase activity
    		•  0.454088447479247 bayes_pls_golite062009
  • protein binding
    		•  0.326999823218261 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.208879786598677 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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