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Protein Overview: gi|15228085, gi|...

General Information:
Name(s) found: gi|4734006 [NCBI NR]
gi|25411054 [NCBI NR]
gi|15228085 [NCBI NR]
Description(s) found:
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  • gi|4734006|gb|AAD28683.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • pir||E84454 hypothetical protein At2g04090 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15228085|ref|NP_178498.1| MATE efflux family protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9SIA1) At2g04090 protein [athaliana3702.FASTAC.txt]
  • hypothetical protein [Arabidopsis thaliana]gi|25411054|pir||E84454 hypothetical protein At2g04090 [imported] - Arabidopsis thalianagi|15228085|ref|NP_178498.1| MATE efflux family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 MATE efflux family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | MATE efflux family protein | chr2:1362720-1364687 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • antiporter/ drug transporter/ transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 483 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    Biological Process: drug transmembrane transport [IEA]
    Molecular Function: antiporter activity [IEA]
    transporter activity [ISS]
    drug transmembrane transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDPLLLGDD QLITRNLKST PTWWMNFTAE LKNVSSMAAP MATVTVSQYL LPVISVMVAG  60
   61 HCGELQLSGV TLATAFANVS GFGIMYGLVG ALETLCGQAY GAKQYTKIGT YTFSAIVSNV 120
  121 PIVVLISILW FYMDKLFVSL GQDPDISKVA GSYAVCLIPA LLAQAVQQPL TRFLQTQGLV 180
  181 LPLLYCAITT LLFHIPVCLI LVYAFGLGSN GAALAIGLSY WFNVLILALY VRFSSACEKT 240
  241 RGFVSDDFVL SVKQFFQYGI PSAAMTTIEW SLFELLILSS GLLPNPKLET SVLSICLTTS 300
  301 SLHCVIPMGI GAAGSTRISN ELGAGNPEVA RLAVFAGIFL WFLEATICST LLFTCKNIFG 360
  361 YAFSNSKEVV DYVTELSSLL CLSFMVDGFS SVLDGVARGS GWQNIGAWAN VVAYYLLGAP 420
  421 VGFFLGFWGH MNGKGLWIGV IVGSTAQGII LAIVTACLSW EEQVNSNLKY IFGHLMNLFF 480
  481 TPY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..242] Pfam 30.0 No description for PF01554.9 was found. No confident structure predictions are available.
    2 View Details [243..483] Pfam 28.721246 No description for PF01554.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle