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Protein Overview: gi|30680205, gi|...

General Information:
Name(s) found: gi|79313151 [NCBI NR]
gi|6642635 [NCBI NR]
gi|63003878 [NCBI NR]
gi|30680205 [NCBI NR]
gi|222424461 [NCBI NR]
Description(s) found:
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  • gi|79313151|ref|NP_001030655.1| eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|6642635|gb|AAF20216.1|AC012395_3 putative translation initiation factor EIF-2B beta subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|63003878|gb|AAY25468.1| At3g07300 [Arabidopsis thaliana] [NCBI NR]
  • gi|30680205|ref|NP_187386.2| eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|222424461|dbj|BAH20186.1| AT3G07300 [Arabidopsis thaliana] [NCBI NR]
  • (Q9SFW0) Putative translation initiation factor EIF-2B beta subunit [athaliana3702.FASTAC.txt]
  • putative translation initiation factor EIF-2B beta subunit [Arabidopsis thaliana]gi|30680205|ref|NP_187386.2| eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Eukaryotic translation initiation factor 2B family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | chr3:2324973-2327386 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • GTP binding / translation initiation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g07300 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative translation initiation factor EIF-2B beta subunit [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | NagB/RpiA/CoA transferase-like superfamily protein | chr3:2324967-2327380 REVERSE LENGTH=407 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT3G07300 protein OS=Arabidopsis thaliana GN=T1B9.3 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of B3H7H1, AT3G07300 protein OS=Arabidopsis thaliana GN=T1B9.3 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular metabolic process [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG  60
   61 EQLIAANPVE LAVGNVVRRV LHIIREEDLS LTTAAMGGLD LLDASDDDDV DNCKGIGFPA 120
  121 MSAAVVAAAA RSTLRPPSLQ TLLEGTPESA TVPYTSSSGA DSESKTADKS SLTRKLKHDV 180
  181 IEGVNQLIQE IAGCHEQIAE QAIEHIHQNE VILTLGSSRT VLEFLCAAKE KKRSFRVFVA 240
  241 EGAPRYQGHL LAKELVARGL QTTVITDSAV FAMISRVNMV IIGAHAVMAN GGVIGPVGVN 300
  301 MAALAAQKHA VPFVVLAGSH KLCPLYPHNP EVLLNELRSP SELLDFGEFS DCLDFGAGSG 360
  361 SLQVVNPTFD YVPPNLVSLF ITDTGGHNPS YMYRLIADYY SADDLVM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] FFAS03 1.48 Crystal structure of the translation initiation factor eIF-2B, subunit delta, from A. fulgidus
    2 View Details [92..407] PSI-BLAST 93.30103 X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima]

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • translation initiation factor activity
    		•  10.1099993541596 bayes_pls_golite062009
  • translation regulator activity
    		•  5.74669335554405 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.59417666488978 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.33012034442687 bayes_pls_golite062009
  • catalytic activity
    		•  1.31732715713197 bayes_pls_golite062009
  • binding
    		•  1.10975674943726 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.09424756417577 bayes_pls_golite062009
  • DNA binding
    		•  0.963080701021607 bayes_pls_golite062009
  • transcription factor activity
    		•  0.452594482400007 bayes_pls_golite062009
  • CoA-transferase activity
    		•  0.0320953696548698 bayes_pls_golite062009
  • protein binding
    		•  0.0293610121675921 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle