| Protein: | gi|30680205, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 407 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30680205, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
393.0 | [0..1] | [407..1] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MPDVQSTVVE FVNKLRKRKI EGSQATAKYT VELLRSVISH QRVPHANQAA ALIDAVKAVG 60
61 EQLIAANPVE LAVGNVVRRV LHIIREEDLS L
|
| Detection Method: |  |
| Confidence: | 1.48 |
| Match: | 1t5oA |
| Description: | Crystal structure of the translation initiation factor eIF-2B, subunit delta, from A. fulgidus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [92-407] |
1 11 21 31 41 51
| | | | | |
1 TTAAMGGLDL LDASDDDDVD NCKGIGFPAM SAAVVAAAAR STLRPPSLQT LLEGTPESAT 60
61 VPYTSSSGAD SESKTADKSS LTRKLKHDVI EGVNQLIQEI AGCHEQIAEQ AIEHIHQNEV 120
121 ILTLGSSRTV LEFLCAAKEK KRSFRVFVAE GAPRYQGHLL AKELVARGLQ TTVITDSAVF 180
181 AMISRVNMVI IGAHAVMANG GVIGPVGVNM AALAAQKHAV PFVVLAGSHK LCPLYPHNPE 240
241 VLLNELRSPS ELLDFGEFSD CLDFGAGSGS LQVVNPTFDY VPPNLVSLFI TDTGGHNPSY 300
301 MYRLIADYYS ADDLVM
|
| Detection Method: | |
| Confidence: | 93.30103 |
| Match: | 1t9kA |
| Description: | X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima] |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation initiation factor activity | 10.1099993541596 | bayes_pls_golite062009 |
| translation regulator activity | 5.74669335554405 | bayes_pls_golite062009 |
| nucleic acid binding | 1.59417666488978 | bayes_pls_golite062009 |
| transcription regulator activity | 1.33012034442687 | bayes_pls_golite062009 |
| catalytic activity | 1.31732715713197 | bayes_pls_golite062009 |
| binding | 1.10975674943726 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.09424756417577 | bayes_pls_golite062009 |
| DNA binding | 0.963080701021607 | bayes_pls_golite062009 |
| transcription factor activity | 0.452594482400007 | bayes_pls_golite062009 |
| CoA-transferase activity | 0.0320953696548698 | bayes_pls_golite062009 |
| protein binding | 0.0293610121675921 | bayes_pls_golite062009 |
