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Protein Overview: gi|15240510, gi|...

General Information:
Name(s) found: gi|15240510 [NCBI NR]
gi|10177624 [NCBI NR]
Description(s) found:
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  • gi|15240510|ref|NP_199769.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177624|dbj|BAB10771.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9FGY8) Similarity to unknown protein [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15240510|ref|NP_199769.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 DNAJ heat shock N-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | DNAJ heat shock N-terminal domain-containing protein | chr5:20141049-20144039 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • heat shock protein binding / unfolded protein binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Chaperone DnaJ-domain superfamily protein | chr5:20123823-20126813 REVERSE LENGTH=695 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Chaperone DnaJ-domain containing protein OS=Arabidopsis thaliana GN=At5g49580 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 695 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKGSHQKN GMDNQTKQKK KTASDSLLSN KGQGKNNEAE SVLKENCQDD KQTKSSPVCE  60
   61 TLERDMDEAK GAASLKDIDQ SVASESDLAG GSRPRNEPGF TTEETRYIPF GREHIDSVMR 120
  121 SLLDILSTNS PSENIELAYN AVLRKLRIST ATVSREMTKC MERHRPLIDS VKLRVYKGRD 180
  181 LVLTKMRQVF PVVFRWLMHF GSIILLLSLV WLDCAIRGFD SFIRMGTASF FSIMWCGLFS 240
  241 AFSMFGMTKF ILISVATVLV ALFIGFVVGS VTLAISGLVL LWLYGSFWTT LLFLFFGGLA 300
  301 FMMKHERVAL FIITVYSVYS ALSYVGWLGL LLAFNLAFIS TDALIYFFKN KINQQSTADR 360
  361 PTEPVNDSSF ENGPGFPGDR GPGVASTSGT DSELTSEDEI ARLLNCPDHY SALGLARYGN 420
  421 VDMAYLKREY RKKAMLVHPD KNMGNERAAE AFKKLQNAYE VLLDSVKQKS YDDELKREEL 480
  481 LNYFRRFQNS SQKDTRGHGF SGSGFGSSEG EGEEAFRECR QIACKKCGNL HAWFLTKKSK 540
  541 STARWCQDCK EFHQAKDGDG WVEQASQHVL FGLFQKVDMP RAYVCADSKI YEASQWYICQ 600
  601 GMRCPANTHK PSFHVNMNAT AAKRGTSGSS GQKGNQRMPN TNPDETMTEE EFYEWLQNAV 660
  661 QSGMFDNARE NPSSATASST SSSSSKKKKK GKKQW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [95..264] deduced N/A No confident structure predictions are available.
    3 View Details [265..405] deduced N/A No confident structure predictions are available.
    4 View Details [406..495] PSI-BLAST 23.30103 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
    5 View Details [496..695] PSI-BLAST 33.69897 The crystal structure of Hsp40 Ydj1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle