| Protein: | gi|15240510, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 695 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240510, gi|....
| Description | E-value | Query Range |
Subject Range |
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554.0 | [0..1] | [665..1] |
|
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304.0 | [0..190] | [616..43] |
|
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291.0 | [0..404] | [693..1] |
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287.0 | [0..403] | [693..1] |
|
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286.0 | [0..404] | [693..1] |
|
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286.0 | [0..404] | [693..1] |
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284.0 | [0..404] | [693..1] |
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283.0 | [0..404] | [693..1] |
|
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282.0 | [0..404] | [693..1] |
|
Region A: Residues: [1-94] |
1 11 21 31 41 51
| | | | | |
1 MARKGSHQKN GMDNQTKQKK KTASDSLLSN KGQGKNNEAE SVLKENCQDD KQTKSSPVCE 60
61 TLERDMDEAK GAASLKDIDQ SVASESDLAG GSRP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.803 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
|
Region A: Residues: [95-264] |
1 11 21 31 41 51
| | | | | |
1 RNEPGFTTEE TRYIPFGREH IDSVMRSLLD ILSTNSPSEN IELAYNAVLR KLRISTATVS 60
61 REMTKCMERH RPLIDSVKLR VYKGRDLVLT KMRQVFPVVF RWLMHFGSII LLLSLVWLDC 120
121 AIRGFDSFIR MGTASFFSIM WCGLFSAFSM FGMTKFILIS VATVLVALFI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [265-405] |
1 11 21 31 41 51
| | | | | |
1 GFVVGSVTLA ISGLVLLWLY GSFWTTLLFL FFGGLAFMMK HERVALFIIT VYSVYSALSY 60
61 VGWLGLLLAF NLAFISTDAL IYFFKNKINQ QSTADRPTEP VNDSSFENGP GFPGDRGPGV 120
121 ASTSGTDSEL TSEDEIARLL N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [406-495] |
1 11 21 31 41 51
| | | | | |
1 CPDHYSALGL ARYGNVDMAY LKREYRKKAM LVHPDKNMGN ERAAEAFKKL QNAYEVLLDS 60
61 VKQKSYDDEL KREELLNYFR RFQNSSQKDT
|
| Detection Method: | |
| Confidence: | 23.30103 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [496-695] |
1 11 21 31 41 51
| | | | | |
1 RGHGFSGSGF GSSEGEGEEA FRECRQIACK KCGNLHAWFL TKKSKSTARW CQDCKEFHQA 60
61 KDGDGWVEQA SQHVLFGLFQ KVDMPRAYVC ADSKIYEASQ WYICQGMRCP ANTHKPSFHV 120
121 NMNATAAKRG TSGSSGQKGN QRMPNTNPDE TMTEEEFYEW LQNAVQSGMF DNARENPSSA 180
181 TASSTSSSSS KKKKKGKKQW
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| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
