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Protein Overview: gi|125546322

General Information:
Name(s) found: gi|125546322 [NCBI NR]
Description(s) found:
  • gi|125546322|gb|EAY92461.1| hypothetical protein OsI_14194 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 725 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKGSQSKS VLNHASPNRQ NAANCEVLNT PESDVMDGEN RSSHVQGGSN VSGVNYGQKT  60
   61 KGIKKNNRSN GISSSGKSDD RASKKQSVDT NYDIGNSGEN DNELSSSTSK ARRDSKRSSR 120
  121 RGCGKNSSIE QTPMPVFAEK VLEKTRCIAC MAASIFRASV MYIIEESKLL LERNRPAITT 180
  181 FMAIVHKGHD YVRSKIKYTY PICRAWMFSA GKLILLLLAV WFNCNIRGFD SLLRLGTNSL 240
  241 LTVLWCSTLS VFAMIGLKKM LILMVIAAAV VAFVGLGFAV LVIAVAAVVI LWLYGSFWTT 300
  301 SGIIILGGAS FFLKHERFAL LVTCLYSMYC AKNYVGWLGL LLSLNLSFIS SDVLVQLLKN 360
  361 NVDNNKSAGS SRNSEQNSGK SGFFGEFRQS SADNTSQSEY AQPSDRGPGD PSTSGAEKEL 420
  421 TSEDEVSRLL NCTDHYSALG FHRYENIDVS LLKREYKKKA MLVHPDKNMG NDKAADAFKK 480
  481 LQNAYEVLLD SLKRKTYDDE LRREELLNYF RRFQSASQKK GGSGIFRQGF SPSEGVDEGP 540
  541 YGLSRRIACK KCGDFHLWIY TGRAKSQARW CQDCNDFHQA KDGDGWVEQS FQPVLFGLLH 600
  601 KPELPHAYVC AESIIFDVTE WFTCQGMRCP ANTHKPSFHV NASLLKQNSG KGSTSAQRGG 660
  661 GIPNGVNMDG GIDEEEFFEW LQNALQSGMF ESFGAQNEPP SPGSGSNAKG SNSSSKKKKK 720
  721 GKKQW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] deduced N/A No confident structure predictions are available.
    2 View Details [107..335] deduced N/A No confident structure predictions are available.
    3 View Details [336..431] deduced N/A No confident structure predictions are available.
    4 View Details [432..519] PSI-BLAST 22.522879 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
    5 View Details [520..725] PSI-BLAST 34.221849 The crystal structure of Hsp40 Ydj1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • binding
    		•  0.036672061154828 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle