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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15240510, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKGSHQKN GMDNQTKQKK KTASDSLLSN KGQGKNNEAE SVLKENCQDD KQTKSSPVCE  60
   61 TLERDMDEAK GAASLKDIDQ SVASESDLAG GSRPRNEPGF TTEETRYIPF GREHIDSVMR 120
  121 SLLDILSTNS PSENIELAYN AVLRKLRIST ATVSREMTKC MERHRPLIDS VKLRVYKGRD 180
  181 LVLTKMRQVF PVVFRWLMHF GSIILLLSLV WLDCAIRGFD SFIRMGTASF FSIMWCGLFS 240
  241 AFSMFGMTKF ILISVATVLV ALFIGFVVGS VTLAISGLVL LWLYGSFWTT LLFLFFGGLA 300
  301 FMMKHERVAL FIITVYSVYS ALSYVGWLGL LLAFNLAFIS TDALIYFFKN KINQQSTADR 360
  361 PTEPVNDSSF ENGPGFPGDR GPGVASTSGT DSELTSEDEI ARLLNCPDHY SALGLARYGN 420
  421 VDMAYLKREY RKKAMLVHPD KNMGNERAAE AFKKLQNAYE VLLDSVKQKS YDDELKREEL 480
  481 LNYFRRFQNS SQKDTRGHGF SGSGFGSSEG EGEEAFRECR QIACKKCGNL HAWFLTKKSK 540
  541 STARWCQDCK EFHQAKDGDG WVEQASQHVL FGLFQKVDMP RAYVCADSKI YEASQWYICQ 600
  601 GMRCPANTHK PSFHVNMNAT AAKRGTSGSS GQKGNQRMPN TNPDETMTEE EFYEWLQNAV 660
  661 QSGMFDNARE NPSSATASST SSSSSKKKKK GKKQW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle