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Protein Overview: gi|10998130, gi|...

General Information:
Name(s) found: gi|6671948 [NCBI NR]
gi|18399411 [NCBI NR]
gi|10998130 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|6671948|gb|AAF23208.1|AC016795_21 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18399411|ref|NP_566405.1| glutaredoxin-related [Arabidopsis thaliana] [NCBI NR]
  • gi|10998130|dbj|BAB03101.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 630 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    cell redox homeostasis [IEA]
    Molecular Function: protein disulfide oxidoreductase activity [IEA]
    electron carrier activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFEESKNNC QNPRKSEKVT NGKSYTISSD IVSPPYSNSN PISDHVHPAT PIPEAVSQSP  60
   61 MKEISIDDPY LPPHPQLPKL EPPRGRRVSL EELLHPKEKF TGDLMKFIRQ SGNAISKRIS 120
  121 VLLENDDDDD SIDDVTEFKI SGVKVLVKMK NEEEIKGRIT FFSRSNCRDS TAVRLFLRER 180
  181 GFDFSEINID VYSSREKELV ERTGSSQVPQ IFFNEKHFGG LMALNSLRNS GEFDRRVKEF 240
  241 LKEKCCGDAP LPVMYGFDEE SNNKDVVVVV DEMMRFVRVL RQKLPIKDRL MKMKIVKNCF 300
  301 SGAEMVEILI DYLDCGRKKA VEIGKRLAEK HFIHHVFGEN EFEDGNHYYR FLEHEPFVSK 360
  361 CYNFRGSTND MEPQSAAIVG QKLFKIMTAI LESYSSNDHT SVDYMRISQS EEFRRYLNLA 420
  421 QDFHRLNLVE LSTEEKLAFF LNLYNAMVIH ALISIGRPEG LIARRSFFTD FQYVVGGYSY 480
  481 SLSSIRNDIL RRGRKPSYPF IRPPFNNGKT RHELGLLKLN PLVHFGLCDG TKSSPVVRFF 540
  541 TPQGVEAELK RAAREFFQNG GIEVVLDKRT IHLSRIIKWY KEDFSEEKKM LKWIMGYIDS 600
  601 NDAGLLTHLL GDGGGSFNIV YQDYDWSTNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 30.69897 C-terminal, Grx domain of Hybrid-Prx5; N-terminal, Prx domain of Hybrid-Prx5
    2 View Details [250..436] PSI-BLAST 19.0 Regulatory domain of epac2, domain 2; Regulatory domain of Epac2, domains 1 and 3
    3 View Details [437..630] Pfam 67.455932 No description for PF04784.5 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142133664747919 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle