| Protein: | gi|10998130, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 630 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10998130, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
343.0 | [0..133] | [629..219] |
|
Region A: Residues: [1-249] |
1 11 21 31 41 51
| | | | | |
1 MRFEESKNNC QNPRKSEKVT NGKSYTISSD IVSPPYSNSN PISDHVHPAT PIPEAVSQSP 60
61 MKEISIDDPY LPPHPQLPKL EPPRGRRVSL EELLHPKEKF TGDLMKFIRQ SGNAISKRIS 120
121 VLLENDDDDD SIDDVTEFKI SGVKVLVKMK NEEEIKGRIT FFSRSNCRDS TAVRLFLRER 180
181 GFDFSEINID VYSSREKELV ERTGSSQVPQ IFFNEKHFGG LMALNSLRNS GEFDRRVKEF 240
241 LKEKCCGDA
|
| Detection Method: |  |
| Confidence: | 30.69897 |
| Match: | 1nm3A |
| Description: | C-terminal, Grx domain of Hybrid-Prx5; N-terminal, Prx domain of Hybrid-Prx5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142133664747919 | bayes_pls_golite062009 |
|
Region A: Residues: [250-436] |
1 11 21 31 41 51
| | | | | |
1 PLPVMYGFDE ESNNKDVVVV VDEMMRFVRV LRQKLPIKDR LMKMKIVKNC FSGAEMVEIL 60
61 IDYLDCGRKK AVEIGKRLAE KHFIHHVFGE NEFEDGNHYY RFLEHEPFVS KCYNFRGSTN 120
121 DMEPQSAAIV GQKLFKIMTA ILESYSSNDH TSVDYMRISQ SEEFRRYLNL AQDFHRLNLV 180
181 ELSTEEK
|
| Detection Method: | |
| Confidence: | 19.0 |
| Match: | 1o7fA |
| Description: | Regulatory domain of epac2, domain 2; Regulatory domain of Epac2, domains 1 and 3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [437-630] |
1 11 21 31 41 51
| | | | | |
1 LAFFLNLYNA MVIHALISIG RPEGLIARRS FFTDFQYVVG GYSYSLSSIR NDILRRGRKP 60
61 SYPFIRPPFN NGKTRHELGL LKLNPLVHFG LCDGTKSSPV VRFFTPQGVE AELKRAAREF 120
121 FQNGGIEVVL DKRTIHLSRI IKWYKEDFSE EKKMLKWIMG YIDSNDAGLL THLLGDGGGS 180
181 FNIVYQDYDW STNN
|
| Detection Method: | |
| Confidence: | 67.455932 |
| Match: | PF04784.5 |
| Description: | No description for PF04784.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
