YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|218197827

General Information:
Name(s) found: gi|218197827 [NCBI NR]
Description(s) found:
  • gi|218197827|gb|EEC80254.1| hypothetical protein OsI_22215 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 711 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENGDKDEKN VAVTEGSTNS EEKDQDEDLL RRTEMLNAKE AINSSNENSG NDSEAQIHVR  60
   61 DDSQKEFNEK MNKEGSSDPM EPTDSSQTEE DILAEDKSEE PVFDGTEVAE MEDLRRSSNQ 120
  121 SVELDSDAHG SVLNERATAI KNFVKEKGAI AVSTFIRRLS GKKDENEFSV EDEKNEGSES 180
  181 ISSGNIGSDA EPKSKEVQPK SEERTTWNPL NLIKIGRDFD TFMTGEAGHE NVPDLIEQPT 240
  241 GKGRIIIYTK LGCEDCKMVR SFMRQKMLKY VEINIDIFPS RKMELENNTG SSTVPKVYFN 300
  301 DLLIGGLTEL KKMEESGILD DRTDALFKDE PSSAAPLPPL PGEDDESGSG KIDELATIVR 360
  361 KMRESITLKD RFYKMRRFSS CFLGSEAVDF LSEDQYLERD EAVEFGRKLA SKYFYRHVLD 420
  421 EDVFEDGNHL YRFLDNDPII MSQCYNIPKG IIDVEPKPIV EVASRLRKLS ETMFEAYVSE 480
  481 DGKHVDYRSI QGCEEFKRYV RTTEELQRVE THELSREEKL AFFINLYNMM AIHALVTCGH 540
  541 PAGPLDRRKF FGDFKYVIGG CAYSMSAIQN GILRGNQRPP YNLAKPFGQK DQRSKVALPY 600
  601 AEPLVHFALV CGTKSGPALR CYSPGNIDKE LVEAARDFLR NVGIVVDPEA KVASVSKILR 660
  661 WYSTDFGKNE TEVLKHAANY LEPAESEQFL ELLANTQLKV LYQPYDWSLN I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..332] PSI-BLAST 48.221849 C-terminal, Grx domain of Hybrid-Prx5; N-terminal, Prx domain of Hybrid-Prx5
    2 View Details [333..514] PSI-BLAST 17.30103 Regulatory domain of epac2, domain 2; Regulatory domain of Epac2, domains 1 and 3
    3 View Details [515..711] MSA 3.148981 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142133664747919 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle