| Protein: | gi|115467176, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 711 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115467176, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..160] | [710..24] |
|
Region A: Residues: [1-332] |
1 11 21 31 41 51
| | | | | |
1 MENGDKDEKN VAVTEGSTNS EEKDQDEDLL RRTEMLNAKE AINSSNENSG NDSEAQIHVR 60
61 DDSQKEFNEK MNKEGSSDPM EPTDSSQTEE DILAEDKSEE PVFDGTEVAE MEDLRRSSNQ 120
121 SVELDSDAHG SVLNERATAI KNFVKEKGAI AVSTFIRRLS GKKDENEFSV EDEKNEGSES 180
181 ISSGNIGSDA EPKSKEVQPK SEERTTWNPL NLIKIGRDFD TFMTGEAGHE NVPDLIEQPT 240
241 GKGRIIIYTK LGCEDCKMVR SFMRQKMLKY VEINIDIFPS RKMELENNTG SSTVPKVYFN 300
301 DLLIGGLTEL KKMEESGILD DRTDALFKDE PS
|
| Detection Method: |  |
| Confidence: | 48.221849 |
| Match: | 1nm3A |
| Description: | C-terminal, Grx domain of Hybrid-Prx5; N-terminal, Prx domain of Hybrid-Prx5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142133664747919 | bayes_pls_golite062009 |
|
Region A: Residues: [333-514] |
1 11 21 31 41 51
| | | | | |
1 SAAPLPPLPG EDDESGSGKI DELATIVRKM RESITLKDRF YKMRRFSSCF LGSEAVDFLS 60
61 EDQYLERDEA VEFGRKLASK YFYRHVLDED VFEDGNHLYR FLDNDPIIMS QCYNIPKGII 120
121 DVEPKPIVEV ASRLRKLSET MFEAYVSEDG KHVDYRSIQG CEEFKRYVRT TEELQRVETH 180
181 EL
|
| Detection Method: | |
| Confidence: | 17.30103 |
| Match: | 1o7fA |
| Description: | Regulatory domain of epac2, domain 2; Regulatory domain of Epac2, domains 1 and 3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [515-711] |
1 11 21 31 41 51
| | | | | |
1 SREEKLAFFI NLYNMMAIHA LVTCGHPAGP LDRRKFFGDF KYVIGGCAYS MSAIQNGILR 60
61 GNQRPPYNLA KPFGQKDQRS KVALPYAEPL VHFALVCGTK SGPALRCYSP GNIDKELVEA 120
121 ARDFLRNVGI VVDPEAKVAS VSKILRWYST DFGKNETEVL KHAANYLEPA ESEQFLELLA 180
181 NTQLKVLYQP YDWSLNI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
