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Protein Overview: SM3L2_ARATH

General Information:
Name(s) found: SM3L2_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1029 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA mediated transformation [IMP]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA][ISS]
    DNA binding [IEA][ISS]
    zinc ion binding [IEA][ISS]
    protein binding [IEA][ISS]
    hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [IEA]
    ATP-dependent helicase activity [IEA]
    helicase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTKVSDDLV STVRSVVGSD YSDMDIIRAL HMANHDPTAA INIIFDTPSF AKPDVATPTP  60
   61 SGSNGGKRVD SGLKGCTFGD SGSVGANHRV EEENESVNGG GEESVSGNEW WFVGCSELAG 120
  121 LSTCKGRKLK SGDELVFTFP HSKGLKPETT PGKRGFGRGR PALRGASDIV RFSTKDSGEI 180
  181 GRIPNEWARC LLPLVRDKKI RIEGSCKSAP EALSIMDTIL LSVSVYINSS MFQKHSATSF 240
  241 KTASNTAEES MFHPLPNLFR LLGLIPFKKA EFTPEDFYSK KRPLSSKDGS AIPTSLLQLN 300
  301 KVKNMNQDAN GDENEQCISD GDLDNIVGVG DSSGLKEMET PHTLLCELRP YQKQALHWMT 360
  361 QLEKGNCTDE AATMLHPCWE AYCLADKREL VVYLNSFTGD ATIHFPSTLQ MARGGILADA 420
  421 MGLGKTVMTI SLLLAHSWKA ASTGFLCPNY EGDKVISSSV DDLTSPPVKA TKFLGFDKRL 480
  481 LEQKSVLQNG GNLIVCPMTL LGQWKTEIEM HAKPGSLSVY VHYGQSRPKD AKLLSQSDVV 540
  541 ITTYGVLTSE FSQENSADHE GIYAVRWFRI VLDEAHTIKN SKSQISLAAA ALVADRRWCL 600
  601 TGTPIQNNLE DLYSLLRFLR IEPWGTWAWW NKLVQKPFEE GDERGLKLVQ SILKPIMLRR 660
  661 TKSSTDREGR PILVLPPADA RVIYCELSES ERDFYDALFK RSKVKFDQFV EQGKVLHNYA 720
  721 SILELLLRLR QCCDHPFLVM SRGDTAEYSD LNKLSKRFLS GKSSGLEREG KDVPSEAFVQ 780
  781 EVVEELRKGE QGECPICLEA LEDAVLTPCA HRLCRECLLA SWRNSTSGLC PVCRNTVSKQ 840
  841 ELITAPTESR FQVDVEKNWV ESSKITALLE ELEGLRSSGS KSILFSQWTA FLDLLQIPLS 900
  901 RNNFSFVRLD GTLSQQQREK VLKEFSEDGS ILVLLMSLKA GGVGINLTAA SNAFVMDPWW 960
  961 NPAVEEQAVM RIHRIGQTKE VKIRRFIVKG TVEERMEAVQ ARKQRMISGA LTDQEVRSAR1020
 1021 IEELKMLFT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] deduced N/A No confident structure predictions are available.
    2 View Details [110..363] PSI-BLAST 10.30103 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2
    3 View Details [364..958] PSI-BLAST 71.221849 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54
    4 View Details [959..1029] PSI-BLAST 31.0 Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle