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Protein Overview: gi|7487646, gi|7...

General Information:
Name(s) found: gi|7487646 [NCBI NR]
gi|7269782 [NCBI NR]
gi|3924608 [NCBI NR]
gi|15236228 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • pir||T01396 hypothetical protein T4I9.15 - Arabidopsis thaliana [NCBI NR]
  • gi|7269782|emb|CAB77782.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|3924608|gb|AAC79109.1| putative ubiquitin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236228|ref|NP_192206.1| AT7SL-1 (Arabidopsis 7SL RNA 1) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: signal recognition particle, endoplasmic reticulum targeting [ISS]
    Biological Process: protein modification process [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVYIDTETG SSFSITIDFG ETVLEIKEKI EKSQGIPVSK QILYLDGKAL EDDLHKIDYM  60
   61 ILFESRLLLR ISPDADPNQS NEQTEQSKQI DDKKQEFCGI QDSSESKKIT RVMARRVHNI 120
  121 YSSLPAYSLD ELLGPKYSAT VAVGGRTNQV VQPTEQASTS GTAKEVLRDS DSPVEKKIKT 180
  181 NPMKFTVHVK PYQEDTRMIH VEVNADDNVE ELRKELVKMQ ERGELNLPHE AFHLLGLGSS 240
  241 ETCPHQNRSE EPNQCPTILM SPHGLQAIVT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] PSI-BLAST 32.09691 No description for 2ojrA was found.
    2 View Details [92..270] MSA 2.126964 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle