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View Structure Prediction Details

Protein: gi|7487646, gi|7...
Organism: Arabidopsis thaliana
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487646, gi|7....

Description E-value Query
Range
Subject
Range
gi|113423966 - gi|113423966|ref|XP_001132949.1| PREDICTED: similar to Ubiquitin-63E CG11624-PA, isoform A [Homo sap...
318.0 [0..1] [269..162]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVYIDTETG SSFSITIDFG ETVLEIKEKI EKSQGIPVSK QILYLDGKAL EDDLHKIDYM  60
   61 ILFESRLLLR ISPDADPNQS NEQTEQSKQI D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.09691
Match: 2ojrA
Description: No description for 2ojrA was found.

Predicted Domain #2
Region A:
Residues: [92-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKKQEFCGIQ DSSESKKITR VMARRVHNIY SSLPAYSLDE LLGPKYSATV AVGGRTNQVV  60
   61 QPTEQASTSG TAKEVLRDSD SPVEKKIKTN PMKFTVHVKP YQEDTRMIHV EVNADDNVEE 120
  121 LRKELVKMQE RGELNLPHEA FHLLGLGSSE TCPHQNRSEE PNQCPTILMS PHGLQAIVT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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