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View Structure Prediction Details

Protein: gi|7487646, gi|7...
Organism: Arabidopsis thaliana
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487646, gi|7....

Description E-value Query
Range
Subject
Range
gi|113423966 - gi|113423966|ref|XP_001132949.1| PREDICTED: similar to Ubiquitin-63E CG11624-PA, isoform A [Homo sap...
318.0 [0..1] [269..162]

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Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVYIDTETG SSFSITIDFG ETVLEIKEKI EKSQGIPVSK QILYLDGKAL EDDLHKIDYM  60
   61 ILFESRLLLR ISPDADPNQS NEQTEQSKQI D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.09691
Match: 2ojrA
Description: No description for 2ojrA was found.

Predicted Domain #2
Region A:
Residues: [92-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKKQEFCGIQ DSSESKKITR VMARRVHNIY SSLPAYSLDE LLGPKYSATV AVGGRTNQVV  60
   61 QPTEQASTSG TAKEVLRDSD SPVEKKIKTN PMKFTVHVKP YQEDTRMIHV EVNADDNVEE 120
  121 LRKELVKMQE RGELNLPHEA FHLLGLGSSE TCPHQNRSEE PNQCPTILMS PHGLQAIVT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.236 N/A N/A d.58.34 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
View Download 0.221 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle