Protein Overview: PTR43_ARATH

General Information:
Name(s) found:	PTR43_ARATH [Swiss-Prot]
Description(s) found: Found 12 descriptions. SHOW ALL	Protein NRT1/ PTR FAMILY 2.1 OS=Arabidopsis thaliana GN=NPF2.1 PE=2 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	555 amino acids
Gene Ontology:
Cellular Component:	membrane [IEA][ISS]
Biological Process:	oligopeptide transport [IEA][ISS]
Molecular Function:	transporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLVLSNDT EAKISGDCKR GGCITFPFMI ATLLGISVTS YGWVLNLIVF LIEEYNIKSI  60
   61 AAAQISNIVN GCLSMLPVVT AILADSFFGN IPVISASAFI SLLGIFLLTL ISSFENLRPR 120
  121 PCETGSILCQ SPSKLHLGVL YAALALVTAG TSGTRVALAS AGANQYDKPR DKGSFFNWYF 180
  181 LTVNTGAIIS ATAIVYTQEN ASWRLGFGLC AAANLISFIV FISGKRFYKH DKPMGSPFTS 240
  241 LIRVLVAAIL KIKVVTSSKE EDYHREVEKE SKTCIGMPSK SFRFLNRAAL KSEKDLNQED 300
  301 GLCHNPWRLC SVEEVEDFKS VLRVLPLWLA ILFVGTSIGV QASMTVLQAL VTDRGLDSKF 360
  361 KVPAGSLQVI VLISSCVFLV LNNWTIYPIY QKITHKQLTP LQQVGIGQVF NILSMAISAI 420
  421 VEAKRLKTVE NEHPMSVLWL LPPLVIVGIG DAFHYMANVA VFYGEFPESM RNTATSVTSV 480
  481 AFGISFYLST ALINLIQRTT AWLPDDINHG RVDNVYWVLV IGGVLNLGYF FVCSWYFTYR 540
  541 KIQDDNRQDP KDVTN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
transporter activity	2.54286095434601	bayes_pls_golite062009
transmembrane transporter activity	2.01247278444729	bayes_pls_golite062009
substrate-specific transporter activity	1.77039368764865	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	1.66673693200184	bayes_pls_golite062009
organic acid transmembrane transporter activity	1.27747734153012	bayes_pls_golite062009
active transmembrane transporter activity	0.33203350453105	bayes_pls_golite062009
polyol transmembrane transporter activity	0.24475883286552	bayes_pls_golite062009
alcohol transmembrane transporter activity	0.24475883286552	bayes_pls_golite062009
glycerol transmembrane transporter activity	0.2309068592963	bayes_pls_golite062009
ion transmembrane transporter activity	0.18188709249385	bayes_pls_golite062009
binding	0.105551689569449	bayes_pls_golite062009
glycerol-3-phosphate transmembrane transporter activity	1.26964387230144E-4	bayes_pls_golite062009

No functions predicted.

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..465]	PSI-BLAST	4.69897	Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
2	View Details	[466..555]	FFAS03	1.0	No description for 2v8nA was found.

Protein Overview: PTR43_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: