| Protein: | PTR43_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 555 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR43_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
313.0 | [0..3] | [541..8] |
|
Region A: Residues: [1-465] |
1 11 21 31 41 51
| | | | | |
1 MAGLVLSNDT EAKISGDCKR GGCITFPFMI ATLLGISVTS YGWVLNLIVF LIEEYNIKSI 60
61 AAAQISNIVN GCLSMLPVVT AILADSFFGN IPVISASAFI SLLGIFLLTL ISSFENLRPR 120
121 PCETGSILCQ SPSKLHLGVL YAALALVTAG TSGTRVALAS AGANQYDKPR DKGSFFNWYF 180
181 LTVNTGAIIS ATAIVYTQEN ASWRLGFGLC AAANLISFIV FISGKRFYKH DKPMGSPFTS 240
241 LIRVLVAAIL KIKVVTSSKE EDYHREVEKE SKTCIGMPSK SFRFLNRAAL KSEKDLNQED 300
301 GLCHNPWRLC SVEEVEDFKS VLRVLPLWLA ILFVGTSIGV QASMTVLQAL VTDRGLDSKF 360
361 KVPAGSLQVI VLISSCVFLV LNNWTIYPIY QKITHKQLTP LQQVGIGQVF NILSMAISAI 420
421 VEAKRLKTVE NEHPMSVLWL LPPLVIVGIG DAFHYMANVA VFYGE
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 2.54286095434601 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.01247278444729 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.77039368764865 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.66673693200184 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.27747734153012 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.33203350453105 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.24475883286552 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.24475883286552 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.2309068592963 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.18188709249385 | bayes_pls_golite062009 |
| binding | 0.105551689569449 | bayes_pls_golite062009 |
| glycerol-3-phosphate transmembrane transporter activity | 1.26964387230144E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [466-555] |
1 11 21 31 41 51
| | | | | |
1 FPESMRNTAT SVTSVAFGIS FYLSTALINL IQRTTAWLPD DINHGRVDNV YWVLVIGGVL 60
61 NLGYFFVCSW YFTYRKIQDD NRQDPKDVTN
|
| Detection Method: | |
| Confidence: | 1.0 |
| Match: | 2v8nA |
| Description: | No description for 2v8nA was found. |
