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Protein Overview: gi|191508198, gi...

General Information:
Name(s) found: gi|6503296 [NCBI NR]
gi|25406698 [NCBI NR]
gi|191508198 [NCBI NR]
gi|15220860 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|6503296|gb|AAF14672.1|AC011713_20 Contains similarity to gi|1168217 DNA-3-methyladenine glycosidase (TAG) protein from Haemophilus influenzae. [Arabidopsis thaliana] [NCBI NR]
  • pir||B96841 hypothetical protein F23A5.20 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|191508198|gb|ACE98542.1| At1g80850 [Arabidopsis thaliana] [NCBI NR]
  • gi|15220860|ref|NP_178200.1| methyladenine glycosylase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 327 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: DNA repair [IEA][ISS]
    base-excision repair [IEA]
    Molecular Function: DNA-3-methyladenine glycosylase I activity [IEA][ISS]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPPRVRSV DSSDREFRSV LGPAGNKLQQ KPLSKPVKKP VAEKTKNLTF TEKMPQCSPL  60
   61 SPPILRRNGI SMTASYSSDA SSSCESSPLS MTSTSSGKRV LRRSGSVSSS SSLRRNLTEE 120
  121 RDEKASDCFC DGRKRCAWIT PKSDQCYIAF HDEEWGVPVH DDKRLFELLS LSGALAELSW 180
  181 KDILSKRQLF REVFMDFDPI AISELTNKKI TSPEIAATTL LSEQKLRSIL ENANQVCKII 240
  241 GAFGSFDKYI WNFVNQKPTQ SQFRYPRQVP VKTSKAELIS KDLVRRGFRS VSPTVIYSFM 300
  301 QTAGLTNDHL TCCFRHHDCM TKDETGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] deduced N/A No confident structure predictions are available.
    2 View Details [134..327] PSI-BLAST 87.154902 No description for 2ofiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle