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View Structure Prediction Details

Protein: gi|191508198, gi...
Organism: Arabidopsis thaliana
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|191508198, gi....

Description E-value Query
Range
Subject
Range
gi|92895786 - gi|92895786|gb|ABE92847.1| Protein prenyltransferase, alpha subunit [Medicago truncatula]
394.0 [0..2] [324..4]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPPRVRSV DSSDREFRSV LGPAGNKLQQ KPLSKPVKKP VAEKTKNLTF TEKMPQCSPL  60
   61 SPPILRRNGI SMTASYSSDA SSSCESSPLS MTSTSSGKRV LRRSGSVSSS SSLRRNLTEE 120
  121 RDEKASDCFC DGR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRCAWITPKS DQCYIAFHDE EWGVPVHDDK RLFELLSLSG ALAELSWKDI LSKRQLFREV  60
   61 FMDFDPIAIS ELTNKKITSP EIAATTLLSE QKLRSILENA NQVCKIIGAF GSFDKYIWNF 120
  121 VNQKPTQSQF RYPRQVPVKT SKAELISKDL VRRGFRSVSP TVIYSFMQTA GLTNDHLTCC 180
  181 FRHHDCMTKD ETGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.154902
Match: 2ofiA
Description: No description for 2ofiA was found.

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Created and Maintained by: Michael Riffle