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Protein Overview: gi|15223677, gi|...

General Information:
Name(s) found: gi|5080795 [NCBI NR]
gi|25518620 [NCBI NR]
gi|15223677 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|5080795|gb|AAD39305.1|AC007576_28 Similar to mandelonitrile lyase [Arabidopsis thaliana] [NCBI NR]
  • pir||F86275 hypothetical protein F7A19.28 - Arabidopsis thaliana [NCBI NR]
  • gi|15223677|ref|NP_172871.1| glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: alcohol metabolic process [IEA]
    Molecular Function: aldehyde-lyase activity [ISS]
    oxidoreductase activity, acting on CH-OH group of donors [IEA]
    FAD binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYMTTDAKE VSGKSFDYIV VGGGTAGCSL AATLSEKYSV LVIERGGSPF GDPLVEERKY  60
   61 FGYSLLNTDE YSSVAQSFTS VDGIENYRGR VLGGSSAING GFYSRASDEF VKKAGWDKGL 120
  121 VQESYKWVES KVVFMPELTQ WQSVVQFGFL EAGFYPYNGY SLEHTQGTKI GGSIYDQCGK 180
  181 RHTSADLLGF GKPNCITVLL NTTVKSIIFD SSNKTRAVGV RFMESDGNSS KSYKVHVEQH 240
  241 RGEVILAAGA LGSPQILLLS GIGPENHLKD FDIPVIVNLK EVGRKMSDNP AISLLVDRFS 300
  301 QNRTLEPPQV AAIAEGYKFI LESEVLPTDI TTTRISIAAK IAFPKSKGRL KLNSTNPREN 360
  361 PSVKFNYLEN KADLDACLEM VLHLQHVARS ETVTFFLGTQ AHDKLVAGDE ELKSFCIKNV 420
  421 RTYYHYHGGC VVGSVVDEEY KVNGVKRLRV VDGSTFEESP GTNPMATVLM LGRYQGIKIL 480
  481 KEREEQEDTF LSPQGSPQPQ P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..501] PSI-BLAST 87.522879 Hydroxynitrile lyase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • choline dehydrogenase activity
    		•  4.66965094791663 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  4.10319574017291 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.3417445147889 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.47575323060551 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • ferredoxin-NADP+ reductase activity
    		•  0.855709010073809 bayes_pls_golite062009
  • ferredoxin reductase activity
    		•  0.855709010073809 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
    		•  0.855709010073809 bayes_pls_golite062009
  • binding
    		•  0.850689563354756 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.442625746935807 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  0.242456601435627 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.170082356807927 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle