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Protein Overview: ATB51_ARATH

General Information:
Name(s) found: ATB51_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: regulation of timing of transition from vegetative to reproductive phase [IGI]
    regulation of transcription, DNA-dependent [ISS]
    bract formation [IGI]
    positive regulation of transcription [IGI]
    leaf morphogenesis [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    sequence-specific DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWSTTSNVE NVRVAFMPPP WPESSSFNSL HSFNFDPYAA GNSYTPGDTQ TGPVISVPES  60
   61 EKIMNAYRFP NNNNEMIKKK RLTSGQLASL ERSFQEEIKL DSDRKVKLSR ELGLQPRQIA 120
  121 VWFQNRRARW KAKQLEQLYD SLRQEYDVVS REKQMLHDEV KKLRALLRDQ GLIKKQISAG 180
  181 TIKVSGEEDT VEISSVVVAH PRTENMNANQ ITGGNQVYGQ YNNPMLVASS GWPSYP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 24.39794 Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA
    2 View Details [156..236] MSA 2.973996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle