General Information: |
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Name(s) found: |
SIGE_ARATH
[Swiss-Prot]
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Description(s) found:
Found 15 descriptions. SHOW ALL |
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Organism: | Arabidopsis thaliana |
Length: | 517 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: |
response to far red light
[IEP]
regulation of transcription, DNA-dependent [ISS] transcription initiation [ISS][TAS] response to blue light [IGI] response to red light [IEP] |
Molecular Function: |
DNA binding
[ISS]
sigma factor activity [ISS] transcription factor activity [ISS] DNA-directed RNA polymerase activity [ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MGVVSISSSA ARSPLGLGND LLTHRSSLKK PSIVAFKADD SSNSALIIPP REQVLIPAEK 60 61 HNEKKREVTR RKPCKTPKKP LSLEHNSAPS CSLGVDYNEA AARLESIYKL SPATTTLVED 120 121 DVEDGGSKAK VSRRRKRKES GEEKKVVVRN NVKKEKRMSL DKRIALKRNV QEKPVVASVD 180 181 KKVTKRQQEE EKIERLVRDY SASNDIVSLD WKKMKIPPVL SSTEHAWLFK LMQPMKALLE 240 241 VKDVLQKSLG REPREAEIAG EINMTAGEVK KKIEIGRAAR NKLIKHNLRL VLFVMNKYFH 300 301 EFTNGPKFQD LCQAGMRGLI TAIDRFEPKR KFRLSTYGLF WIRHAIIRSM TTSNFTRVPF 360 361 GLESVRVEIY KAKTELWFEM GRPPTEDEVV ERLKITPERY REVLRAAKPV LSLNSKHSVT 420 421 QEEFINGITD VDGVGANNSR QPALLRLALD DVLDSLKPKE SLVIRQRYGL DGKGDRTLGE 480 481 IAGNLNISRE MVRKHEVKAL MKLKHQARVD YLRQYIV |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..125] | 41.522879 | CRYSTAL STRUCTURE OF A SIGMA70 SUBUNIT FRAGMENT FROM ESCHERICHIA COLI RNA POLYMERASE | |
2 | View Details | [126..517] | 59.221849 | DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.93 |
Source: Reynolds et al. (2008)