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Protein Overview: RSZ32_ARATH

General Information:
Name(s) found: RSZ32_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana GN=RS2Z32 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 284 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEA]
    Biological Process: RNA splicing [NAS]
    nuclear mRNA splicing, via spliceosome [TAS]
    Molecular Function: nucleic acid binding [IEA][ISS]
    nucleotide binding [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRYDDRYGN TRLYVGRLSS RTRTRDLERL FSRYGRVRDV DMKRDYAFVE FSDPRDADDA  60
   61 RYYLDGRDFD GSRITVEASR GAPRGSRDNG SRGPPPGSGR CFNCGVDGHW ARDCTAGDWK 120
  121 NKCYRCGERG HIERNCKNSP SPKKARQGGS YSRSPVKSRS PRRRRSPSRS RSYSRGRSYS 180
  181 RSRSPVRREK SVEDRSRSPK AMERSVSPKG RDQSLSPDRK VIDASPKRGS DYDGSPKENG 240
  241 NGRNSASPIV GGGESPVGLN GQDRSPIDDE AELSRPSPKG SESP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] PSI-BLAST 15.154902 HNRNP A1 (RBD1,2) FROM HOMO SAPIENS
    2 View Details [107..174] FFAS03 1.55 Solution Structure of the Zinc-finger domain in LIN-28
    3 View Details [175..284] MSA 1.256996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle