| Protein: | RSZ32_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 284 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSZ32_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
128.0 | [0..39] | [261..326] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MPRYDDRYGN TRLYVGRLSS RTRTRDLERL FSRYGRVRDV DMKRDYAFVE FSDPRDADDA 60
61 RYYLDGRDFD GSRITVEASR GAPRGSRDNG SRGPPPGSGR CFNCGV
|
| Detection Method: |  |
| Confidence: | 15.154902 |
| Match: | 1ha1A |
| Description: | HNRNP A1 (RBD1,2) FROM HOMO SAPIENS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [107-174] |
1 11 21 31 41 51
| | | | | |
1 DGHWARDCTA GDWKNKCYRC GERGHIERNC KNSPSPKKAR QGGSYSRSPV KSRSPRRRRS 60
61 PSRSRSYS
|
| Detection Method: | |
| Confidence: | 1.55 |
| Match: | 2cqfA |
| Description: | Solution Structure of the Zinc-finger domain in LIN-28 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [175-284] |
1 11 21 31 41 51
| | | | | |
1 RGRSYSRSRS PVRREKSVED RSRSPKAMER SVSPKGRDQS LSPDRKVIDA SPKRGSDYDG 60
61 SPKENGNGRN SASPIVGGGE SPVGLNGQDR SPIDDEAELS RPSPKGSESP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
