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Protein Overview: ERF92_ARATH

General Information:
Name(s) found: ERF92_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7939534|dbj|BAA95737.1| ethylene response DNA binding protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|57012702|sp|Q8LDC8.2|ERF92_ARATH RecName: Full=Ethylene-responsive transcription factor 1B; Short=AtERF1B; AltName: Full=Ethylene-responsive element-binding factor 1B; Short=EREBP-1B [NCBI NR]
  • gi|4128210|gb|AAD03545.1| ethylene response factor 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|4128208|gb|AAD03544.1| ethylene response factor 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|22137228|gb|AAM91459.1| AT3g23240/K14B15_13 [Arabidopsis thaliana] [NCBI NR]
  • gi|16226399|gb|AAL16158.1|AF428390_1 AT3g23240/K14B15_13 [Arabidopsis thaliana] [NCBI NR]
  • gi|15229405|ref|NP_188965.1| ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=1 SV=2 [Swiss-Prot]
  • Ethylene-responsive transcription factor 1B (Ethylene-responsive element-binding factor 1B) (EREBP-1B) (AtERF1) - Arabidopsis thaliana (Mouse-ear cress) [Swiss-Prot]
  • (Q9ZNR2) Ethylene response factor 1 (Ethylene response DNA binding protein-like) (AT3G23240/K14B15_13) [athaliana3702.FASTAC.txt]
  • ethylene response DNA binding protein-like [Arabidopsis thaliana]gi|22137228|gb|AAM91459.1| AT3g23240/K14B15_13 [Arabidopsis thaliana]gi|16226399|gb|AAL16158.1| AT3g23240/K14B15_13 [Arabidopsis thaliana]gi|4128210|gb|AAD03545.1| ethylene response facto [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ethylene-responsive transcription factor 1B [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATERF1, ERF1 | ATERF1/ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor | chr3:8295712-8296368 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g23240/K14B15_13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ethylene response factor 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ethylene response DNA binding protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Ethylene-responsive transcription factor 1B (Ethylene-responsive element-binding factor 1B) (EREBP-1B) (AtERF1) [nr-271106-contam.fasta]
  • ATERF1/ERF1; DNA binding / transcription factor/ transcriptional activator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ERF1, ATERF1 | ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: regulation of transcription, DNA-dependent [TAS]
    ethylene mediated signaling pathway [IGI][TAS]
    defense response [IMP]
    jasmonic acid mediated signaling pathway [TAS]
    Molecular Function: DNA binding [IDA][TAS]
    transcription factor activity [ISS][TAS]
    transcription activator activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY  60
   61 IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS TRNGIRVWLG TFESAEEAAL 120
  121 AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK 180
  181 DSDFDHRSVK LDNVVVFEDL GEQYLEELLG SSENSGTW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 24.154902 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle