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View Structure Prediction Details

Protein: ERF92_ARATH
Organism: Arabidopsis thaliana
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF92_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554205 - gi|21554205|gb|AAM63284.1| ethylene response factor ERF1 [Arabidopsis thaliana]
200.0 [0..1] [218..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY  60
   61 IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS TRNGIRVWLG TFESAEEAAL 120
  121 AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK 180
  181 DSDFDHRSVK LDNVVVFEDL GEQYLEELLG SSENSGTW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.154902
Match: 2gccA
Description: SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.339357445627225 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle