Protein Overview: gi|15219158, gi|...

General Information:
Name(s) found:	gi\|3834321 [NCBI NR] gi\|25307853 [NCBI NR] gi\|15219158 [NCBI NR]
Description(s) found: Found 11 descriptions. SHOW ALL	gi\|3834321\|gb\|AAC83037.1\| Strong similarity to F13P17.9 gi\|3337356 transport protein SEC61 alpha subunit homolog from Arabidopsis thaliana BAC gb\|AC004481 [NCBI NR] pir\|\|B96816 hypothetical protein F9K20.24 [imported] - Arabidopsis thaliana [NCBI NR] gi\|15219158\|ref\|NP_177993.1\| protein transport protein sec61, putative [Arabidopsis thaliana] [NCBI NR]
Organism:	Arabidopsis thaliana
Length:	475 amino acids
Gene Ontology:
Cellular Component:	membrane [IEA][ISS]
Biological Process:	protein transport [IEA] protein secretion [ISS]
Molecular Function:	P-P-bond-hydrolysis-driven protein transmembrane transporter activity [IEA][ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGFRVIHL VRPFLAFLPE VQSPERKIPF REKVIYTVIS LFIFLVCSQL PLYGIHSTTG  60
   61 ADPFYWMRVI LASSRGTVME LGITPIVTSG MVMQLLAGSK IIEIDNNVRE DRALLNGAQK 120
  121 LLGILIAVGQ AVAYVLSGMY GSVGELGVGN AILIIVQLCF AAIIVLCLDE LLQKGYGLGS 180
  181 GISLFIATNI CESIIWKAFS PTTINSGRGA QFEGAVIALF HLLITRTDKV RALREAFFRQ 240
  241 NLPNVTNLHA TVLIFLIVIY FQGFRVVLPV RSKNARGQRG SYPIKLFYTS NMPIILQSAL 300
  301 VSNIYFISQI LYRKFGGNFL VNLIGTWKES EYSGQSIPVG GIAYYITAPS SLAEMATHPF 360
  361 HALFYLVFML AACALFSKTW IEVSGSSAKD VARQLREQQM VMPGHRDSNL QKELNRYIPT 420
  421 AAAFGGLCIG ALTVLADLMG AIGSGTGILL AVTIIYQYFE TFEKEKASEL GFFGL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
ribonucleoprotein binding	5.96221631042313	bayes_pls_golite062009
protein transporter activity	5.55929343005534	bayes_pls_golite062009
transporter activity	3.32223562584466	bayes_pls_golite062009
substrate-specific transporter activity	3.22714325269757	bayes_pls_golite062009
P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.12732472524264	bayes_pls_golite062009
macromolecule transmembrane transporter activity	2.12732472524264	bayes_pls_golite062009
protein transmembrane transporter activity	1.76187269823414	bayes_pls_golite062009
transmembrane transporter activity	1.67782980643723	bayes_pls_golite062009
binding	1.4562802789412	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	1.42890247609405	bayes_pls_golite062009
primary active transmembrane transporter activity	1.15847548838424	bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity	1.15316743403707	bayes_pls_golite062009
active transmembrane transporter activity	1.10003802565492	bayes_pls_golite062009
peptide transporter activity	1.01893828721893	bayes_pls_golite062009
protein binding	0.674651002700028	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..475]	PSI-BLAST	76.69897	The structure of a protein conducting channel

Protein Overview: gi|15219158, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: