| Protein: | gi|15219158, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 475 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15219158, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
529.0 | [0..4] | [466..1012] |
|
Region A: Residues: [1-475] |
1 11 21 31 41 51
| | | | | |
1 MVGGFRVIHL VRPFLAFLPE VQSPERKIPF REKVIYTVIS LFIFLVCSQL PLYGIHSTTG 60
61 ADPFYWMRVI LASSRGTVME LGITPIVTSG MVMQLLAGSK IIEIDNNVRE DRALLNGAQK 120
121 LLGILIAVGQ AVAYVLSGMY GSVGELGVGN AILIIVQLCF AAIIVLCLDE LLQKGYGLGS 180
181 GISLFIATNI CESIIWKAFS PTTINSGRGA QFEGAVIALF HLLITRTDKV RALREAFFRQ 240
241 NLPNVTNLHA TVLIFLIVIY FQGFRVVLPV RSKNARGQRG SYPIKLFYTS NMPIILQSAL 300
301 VSNIYFISQI LYRKFGGNFL VNLIGTWKES EYSGQSIPVG GIAYYITAPS SLAEMATHPF 360
361 HALFYLVFML AACALFSKTW IEVSGSSAKD VARQLREQQM VMPGHRDSNL QKELNRYIPT 420
421 AAAFGGLCIG ALTVLADLMG AIGSGTGILL AVTIIYQYFE TFEKEKASEL GFFGL
|
| Detection Method: |  |
| Confidence: | 76.69897 |
| Match: | 1rh5A |
| Description: | The structure of a protein conducting channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonucleoprotein binding | 5.96221631042313 | bayes_pls_golite062009 |
| protein transporter activity | 5.55929343005534 | bayes_pls_golite062009 |
| transporter activity | 3.32223562584466 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.22714325269757 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.12732472524264 | bayes_pls_golite062009 |
| macromolecule transmembrane transporter activity | 2.12732472524264 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 1.76187269823414 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.67782980643723 | bayes_pls_golite062009 |
| binding | 1.4562802789412 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.42890247609405 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 1.15847548838424 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 1.15316743403707 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.10003802565492 | bayes_pls_golite062009 |
| peptide transporter activity | 1.01893828721893 | bayes_pls_golite062009 |
| protein binding | 0.674651002700028 | bayes_pls_golite062009 |
