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Protein Overview: gi|50897172, gi|...

General Information:
Name(s) found: gi|50897172 [NCBI NR]
gi|15238207 [NCBI NR]
gi|10177371 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis thaliana] [NCBI NR]
  • gi|15238207|ref|NP_199002.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177371|dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 449 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA][ISS]
    Molecular Function: polygalacturonase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISQAPISV FVLFLLSTVL PHHLSLGAPI TCSGIVPMKH RNEMLSISDF GAVGDGKTLN  60
   61 TKAFNSAIDR IRNSNNSNEG TLLYVPRGVY LTQSFNLTSH MTLYLADGAV IKAVQDTEKW 120
  121 PLTDPLPSYG RGREHPGRRY ISFIHGDGLN DVVITGRNGT IDGQGEPWWN MWRHGTLKFT 180
  181 RPGLIEFNNS TNILVSHVVL QNSPFWTLHP VYCSNVVVHH VTILAPTDSY NTDGIDPDSS 240
  241 SNVCIEDSYI STGDDLVAVK SGWDEYGIAY NRPSRDITIR RITGSSPFAG IAIGSETSGG 300
  301 IQNVTVENIT LYNSGIGIHI KTNIGRGGSI QGITISGVYL EKVRTGIKIS GDTGDHPDDK 360
  361 FNTSALPIVR GITIKNVWGI KVERAGMVQG LKDSPFTNLC FSNVTLTGTK RSPIWKCSDV 420
  421 VGAADKVNPT PCPELSATTQ QGGSCENQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..449] PSI-BLAST 56.0 No description for 2uveA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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