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View Structure Prediction Details

Protein: gi|50897172, gi|...
Organism: Arabidopsis thaliana
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50897172, gi|....

Description E-value Query
Range
Subject
Range
gi|50919915, gi|... - gi|50919915|ref|XP_470318.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)], gi...
341.0 [0..3] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISQAPISV FVLFLLSTVL PHHLSLGAPI TCSGIVPMKH RNEMLSISDF GAVGDGKTLN  60
   61 TKAFNSAIDR IRNSNNSNEG TLLYVPRGVY LTQSFNLTSH MTLYLADGAV IKAVQDTEKW 120
  121 PLTDPLPSYG RGREHPGRRY ISFIHGDGLN DVVITGRNGT IDGQGEPWWN MWRHGTLKFT 180
  181 RPGLIEFNNS TNILVSHVVL QNSPFWTLHP VYCSNVVVHH VTILAPTDSY NTDGIDPDSS 240
  241 SNVCIEDSYI STGDDLVAVK SGWDEYGIAY NRPSRDITIR RITGSSPFAG IAIGSETSGG 300
  301 IQNVTVENIT LYNSGIGIHI KTNIGRGGSI QGITISGVYL EKVRTGIKIS GDTGDHPDDK 360
  361 FNTSALPIVR GITIKNVWGI KVERAGMVQG LKDSPFTNLC FSNVTLTGTK RSPIWKCSDV 420
  421 VGAADKVNPT PCPELSATTQ QGGSCENQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.0
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle