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Protein Overview: IPYR4_ARATH

General Information:
Name(s) found: IPYR4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6729513|emb|CAB67669.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231849|ref|NP_190930.1| AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase [NCBI NR]
  • pir||T45902 inorganic pyrophosphatase-like protein - Arabidopsis thaliana [NCBI NR]
  • gi|110741493|dbj|BAE98700.1| inorganic pyrophosphatase -like protein [Arabidopsis thaliana] [NCBI NR]
  • Soluble inorganic pyrophosphatase 4 OS=Arabidopsis thaliana GN=PPA4 PE=1 SV=1 [Swiss-Prot]
  • (Q9LFF9) Inorganic pyrophosphatase-like protein [athaliana3702.FASTAC.txt]
  • inorganic pyrophosphatase-like protein [Arabidopsis thaliana]gi|15231849|ref|NP_190930.1| inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative [Arabidopsis thaliana]gi|11266401|pir||T45902 inorganic [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Inorganic pyrophosphatase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATPPA4 | ATPPA4 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 4); inorganic diphosphatase/ pyrophosphatase | chr3:19892469-19894286 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • inorganic pyrophosphatase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • inorganic diphosphatase/ magnesium ion binding / pyrophosphatase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • inorganic pyrophosphatase -like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AtPPa4, PPa4 | pyrophosphorylase 4 | chr3:19881491-19883308 FORWARD LENGTH=216 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Inorganic pyrophosphatase-like protein OS=Arabidopsis thaliana GN=F4P12_320 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 216 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    membrane [ISS]
    Biological Process: metabolic process [ISS]
    response to cadmium ion [IEP]
    Molecular Function: inorganic diphosphatase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPIEVSTK SYVEKHVSLP TLNERILSSM SHRSVAAHPW HDLEIGPEAP IIFNCVVEIG  60
   61 KGSKVKYELD KTTGLIKVDR ILYSSVVYPH NYGFIPRTLC EDSDPIDVLV IMQEPVIPGC 120
  121 FLRAKAIGLM PMIDQGEKDD KIIAVCADDP EYRHYNDISE LPPHRMAEIR RFFEDYKKNE 180
  181 NKEVAVNDFL PATAAYDAVQ HSMDLYADYV VENLRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..216] PSI-BLAST 66.522879 Crystal structure of the Inorganic pyrophosphatase from the hyperthermophilic archaeon Pyrococcus horikoshii OT3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • inorganic diphosphatase activity
    		•  2.74116819406619 bayes_pls_golite062009
  • catalytic activity
    		•  1.33262120571864 bayes_pls_golite062009
  • binding
    		•  0.947569244871282 bayes_pls_golite062009
  • hydrolase activity
    		•  0.622613523623213 bayes_pls_golite062009
  • protein binding
    		•  0.30018672253552 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.130183342564216 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.129135337748915 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.125429411374269 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle