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Protein Overview: gi|66865920, gi|...

General Information:
Name(s) found: gi|79322754 [NCBI NR]
gi|66865920 [NCBI NR]
gi|4314366 [NCBI NR]
gi|25412130 [NCBI NR]
gi|18400050 [NCBI NR]
gi|109946419 [NCBI NR]
Description(s) found:
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  • gi|79322754|ref|NP_001031397.1| protein binding / zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|66865920|gb|AAY57594.1| RING finger family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|4314366|gb|AAD15577.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F84615 hypothetical protein At2g22690 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18400050|ref|NP_565541.1| protein binding / zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|109946419|gb|ABG48388.1| At2g22690 [Arabidopsis thaliana] [NCBI NR]
  • (Q9ZQ45) At2g22690 protein [athaliana3702.FASTAC.txt]
  • expressed protein [Arabidopsis thaliana]gi|25412130|pir||F84615 hypothetical protein At2g22690 [imported] - Arabidopsis thalianagi|18400050|ref|NP_565541.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protein binding / zinc ion binding | chr2:9656900-9658045 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RING finger family protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g22690 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | zinc ion binding | chr2:9649820-9650965 REVERSE LENGTH=381 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g22690 OS=Arabidopsis thaliana GN=At2g22690 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELKNVKDAF DRVTKKQKLC YSKTHEVVDK MSQEIDKALK TIQEDNHESV VADLKKTFEE  60
   61 IAPINLLEAS QKEINGVLTK YPKALDKTLN PDISTAYRNV KFDTHTVHQI LAQFFYRQGM 120
  121 YDVGDCFISE TGEVKPESSV TKAFMEMNMI LEAMKERDLG PALKWVASNS DKLKEAKSDL 180
  181 ELKLHSLHFL EIAKDKTSEE AINYARKHFA TYSADSCCFP EIQKLMCSLL WIRNLNKSPY 240
  241 SEFLSPVLWT NAAKELTRQY CILLGESPES PLSVTVAAGS QVLPTFLKYL NVLPEKRKEW 300
  301 QTMEQLLVPV ELSEEYRFYS VFVCPVSKEH SSEDNPPMRL ACGHVLCKQS INRMSRNGSR 360
  361 SFKCPYCPTD IDASQCKQLY F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 16.221849 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.12724619324809 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  2.53071837898279 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  2.35007226898734 bayes_pls_golite062009
  • protein binding
    		•  2.14586566310919 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.79278689121507 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.60687631865164 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.59077352153329 bayes_pls_golite062009
  • DNA binding
    		•  1.49540318847431 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.937092252245555 bayes_pls_golite062009
  • transcription factor activity
    		•  0.862300124095671 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.748479359639348 bayes_pls_golite062009
  • kinase activity
    		•  0.662911740280035 bayes_pls_golite062009
  • molecular adaptor activity
    		•  0.657981592359252 bayes_pls_golite062009
  • SH3/SH2 adaptor activity
    		•  0.559549509453052 bayes_pls_golite062009
  • phosphoprotein binding
    		•  0.53553338374323 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.493362981045534 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.452350351194157 bayes_pls_golite062009
  • protein phosphorylated amino acid binding
    		•  0.43808715710519 bayes_pls_golite062009
  • protein kinase activity
    		•  0.373245013550244 bayes_pls_golite062009
  • protein binding, bridging
    		•  0.370788151516215 bayes_pls_golite062009
  • transferase activity
    		•  0.169970258787201 bayes_pls_golite062009
  • signal transducer activity
    		•  0.150891693412241 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.150891693412241 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle