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Protein Overview: UBA1A_ARATH

General Information:
Name(s) found: UBA1A_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: mRNA stabilization [NAS]
    Molecular Function: AU-rich element binding [IDA]
    RNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTLDKSKK RKLVKSKSTN FDKKQKINKQ QQQPESSTPY SSSSSSSDSS DSESDNEFDP  60
   61 EELRELLQPY SKDQLVDLVC SASRIGSSIY SAVVEAADRD VTHRKIFVYG LPWETTRETL 120
  121 VGVFEGYGEI EECTVVIDKA TGKAKGFGFV MFKTRKGAKE ALKEPKKRIL NRTATCQLAS 180
  181 MGPAASGKGH DQPGPVKISM GSMANHGQPQ QQQVQGQHVF NGGGMAASPF MLGNQYHPLY 240
  241 GAGMLGNPAL AAAAAAGGGY MYPMLAGALA HGGLGSDMVQ SSQMGGIGVD PSVGAAGLSA 300
  301 LGSYFRGQSL PSTYPDSDAG GKRGTGKDSD AGGSSFHGYS NYS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] PSI-BLAST 48.0 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
    2 View Details [196..343] PSI-BLAST 4.39794 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle