| Protein: | UBA1A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBA1A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
189.0 | [0..1] | [195..1] |
|
Region A: Residues: [1-195] |
1 11 21 31 41 51
| | | | | |
1 MAKTLDKSKK RKLVKSKSTN FDKKQKINKQ QQQPESSTPY SSSSSSSDSS DSESDNEFDP 60
61 EELRELLQPY SKDQLVDLVC SASRIGSSIY SAVVEAADRD VTHRKIFVYG LPWETTRETL 120
121 VGVFEGYGEI EECTVVIDKA TGKAKGFGFV MFKTRKGAKE ALKEPKKRIL NRTATCQLAS 180
181 MGPAASGKGH DQPGP
|
| Detection Method: |  |
| Confidence: | 48.0 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [196-343] |
1 11 21 31 41 51
| | | | | |
1 VKISMGSMAN HGQPQQQQVQ GQHVFNGGGM AASPFMLGNQ YHPLYGAGML GNPALAAAAA 60
61 AGGGYMYPML AGALAHGGLG SDMVQSSQMG GIGVDPSVGA AGLSALGSYF RGQSLPSTYP 120
121 DSDAGGKRGT GKDSDAGGSS FHGYSNYS
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
