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Protein Overview: PEL2_ARATH

General Information:
Name(s) found: PEL2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6735351|emb|CAB68177.1| pelota-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231020|ref|NP_191398.1| eukaryotic release factor 1 family protein / eRF1 family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T45999 pelota-like protein - Arabidopsis thaliana [NCBI NR]
  • Protein PELOTA 2 OS=Arabidopsis thaliana GN=PEL2 PE=3 SV=1 [Swiss-Prot]
  • (Q9M2H7) Pelota-like protein [athaliana3702.FASTAC.txt]
  • pelota-like protein [Arabidopsis thaliana]gi|11279545|pir||T45999 pelota-like protein - Arabidopsis thalianagi|15231020|ref|NP_191398.1| eukaryotic release factor 1 family protein / eRF1 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Eukaryotic release factor 1 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | eukaryotic release factor 1 family protein / eRF1 family protein | chr3:21611007-21612194 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • translation release factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pelota-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Eukaryotic release factor 1 (eRF1) family protein | chr3:21600030-21601217 REVERSE LENGTH=395 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Eukaryotic release factor 1 (ERF1) family protein OS=Arabidopsis thaliana GN=F9D24.300 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: translational termination [ISS]
    translation [IEA]
    Molecular Function: translation release factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIRKDFVR NGPGSVKMMA EDSDDLWYTY NLIGPEDSVM AITFRKVGGE GRDSTPSLSR  60
   61 IESKYLGKKR SFTRTERVKL KLEVQVEEVD YDKDGDVMRI RGKNIMENEH VRIGAFHTLE 120
  121 IELKRPFLLR KENWDSLALD TLKQASDLAA SADLAVVLMQ EGLAQIFLAG KSVKSCGARI 180
  181 KTSIPWKHGA GTAGYESVLK KFFENVVQAF LKHVDFSVVR CAVIASPGFT KDQFHRHLLL 240
  241 EAERRQLRPI LENKSRFILV HTNSGYKHSL SEVLHDPNVM NMIKDTKAAK EVKALNDFFT 300
  301 MFSNDPNRAC YGPKHVEVAH ERMAIQTLLI IDGLFRNSDV KTRKKYVDFV ESVKDSGGEV 360
  361 FIFSSMHASG EQLAQHTGIA AILRFPLPDL EDIEM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..395] PSI-BLAST 115.0 Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA binding
    		•  3.8176240743328 bayes_pls_golite062009
  • translation release factor activity
    		•  3.48975835887408 bayes_pls_golite062009
  • translation termination factor activity
    		•  3.46050614877315 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.50763528378297 bayes_pls_golite062009
  • binding
    		•  2.24516466558786 bayes_pls_golite062009
  • structural molecule activity
    		•  2.17996532926344 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.09371417164502 bayes_pls_golite062009
  • translation regulator activity
    		•  1.83257472130927 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.81472167858216 bayes_pls_golite062009
  • mRNA binding
    		•  1.38466459724533 bayes_pls_golite062009
    		• 1.36644447800624 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.519765773143644 bayes_pls_golite062009
  • protein binding
    		•  0.381324299701367 bayes_pls_golite062009
  • hydrolase activity
    		•  0.341035995293011 bayes_pls_golite062009
  • catalytic activity
    		•  0.264002643439785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle