| Protein: | PEL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
426.0 | [0..2] | [388..19] |
|
Region A: Residues: [1-395] |
1 11 21 31 41 51
| | | | | |
1 MKIIRKDFVR NGPGSVKMMA EDSDDLWYTY NLIGPEDSVM AITFRKVGGE GRDSTPSLSR 60
61 IESKYLGKKR SFTRTERVKL KLEVQVEEVD YDKDGDVMRI RGKNIMENEH VRIGAFHTLE 120
121 IELKRPFLLR KENWDSLALD TLKQASDLAA SADLAVVLMQ EGLAQIFLAG KSVKSCGARI 180
181 KTSIPWKHGA GTAGYESVLK KFFENVVQAF LKHVDFSVVR CAVIASPGFT KDQFHRHLLL 240
241 EAERRQLRPI LENKSRFILV HTNSGYKHSL SEVLHDPNVM NMIKDTKAAK EVKALNDFFT 300
301 MFSNDPNRAC YGPKHVEVAH ERMAIQTLLI IDGLFRNSDV KTRKKYVDFV ESVKDSGGEV 360
361 FIFSSMHASG EQLAQHTGIA AILRFPLPDL EDIEM
|
| Detection Method: |  |
| Confidence: | 115.0 |
| Match: | 1dt9A |
| Description: | Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 3.8176240743328 | bayes_pls_golite062009 |
| translation release factor activity | 3.48975835887408 | bayes_pls_golite062009 |
| translation termination factor activity | 3.46050614877315 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.50763528378297 | bayes_pls_golite062009 |
| binding | 2.24516466558786 | bayes_pls_golite062009 |
| structural molecule activity | 2.17996532926344 | bayes_pls_golite062009 |
| nucleic acid binding | 2.09371417164502 | bayes_pls_golite062009 |
| translation regulator activity | 1.83257472130927 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.81472167858216 | bayes_pls_golite062009 |
| mRNA binding | 1.38466459724533 | bayes_pls_golite062009 |
| 1.36644447800624 | bayes_pls_golite062009 | |
| ribonuclease activity | 0.519765773143644 | bayes_pls_golite062009 |
| protein binding | 0.381324299701367 | bayes_pls_golite062009 |
| hydrolase activity | 0.341035995293011 | bayes_pls_golite062009 |
| catalytic activity | 0.264002643439785 | bayes_pls_golite062009 |
